Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04803 ATGATGAACAATATCTCATCTGTGGCGTACATAAAACGGTTGGTTATTGAACTCGATAACCTTGAGCTCAGGGAAAATGCTCTTCGTGTGCTCTCCAAGAGGAAGGACTTATTTCATGAACTTGCACCTTTATTGTGGCATTCTGTTGGCACTATTGCAGTATTATTACTGGAAATAACTTCAATATATGATAATCTTTCACCACCAACTCTTTCTACTGCACAATCAACTCGAGTGTGCAATGTTCTTGCATTAGTTCAGTGTGTGGCATCTCACCCTGATACAAGGATGTTACTCATCAATGCTTTCATACCACAGTTTCTGTTTCCTTTCCTTGAAACGACATGTACCTTACCCCAATTTGACAATTTGAGGCTTGCGACTCTCGGAGTCATTGGTGTCTTGGTAAAGGCCAAAAGCAAAGAAGTTATAGATTATCTTCTTTCAACTGAAATCGTTCCATTATGTTTGCGTATCATGGAGATCGGGAAAGAAATGTCAAAAACTGTTGCTACTTTCATCCTACAAAAAATTTTGTTGGATGAAGATGGTCTTGCTTGTGTATGTGCTACCGCAGACCGTTTCTTTTTTGTATGTCGAATTTTGAATATGGTGATGGAAAAAATTCAAAGACAACCTTCACCTCGGCTTTTGAAACTTATAATTCCATGTTATGCTCGTTTGTCTCAAAATCCCGGGGCTGGCGTTGCATTAACAAACTCTCTTCCGGCTGTGTTTGCTAACCCCGCTTTCATCAATTACCTTCGTGGAGATCCAGCAACTTGGAGTTGGGCAGAGCAATTGTATGAAAATATAAGGAAGAATGAAGTTCAGTCAGCACAATCTGAAATAAAAATGGATGGTATTATGTGGTACACATCATCAGGACAGAATAAATGA 900 0.3922 MMNNISSVAYIKRLVIELDNLELRENALRVLSKRKDLFHELAPLLWHSVGTIAVLLLEITSIYDNLSPPTLSTAQSTRVCNVLALVQCVASHPDTRMLLINAFIPQFLFPFLETTCTLPQFDNLRLATLGVIGVLVKAKSKEVIDYLLSTEIVPLCLRIMEIGKEMSKTVATFILQKILLDEDGLACVCATADRFFFVCRILNMVMEKIQRQPSPRLLKLIIPCYARLSQNPGAGVALTNSLPAVFANPAFINYLRGDPATWSWAEQLYENIRKNEVQSAQSEIKMDGIMWYTSSGQNK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04803 299 PANTHER UNCHARACTERIZED 8 276 IPR007216 GO:0006402|GO:0030014
Trre10g04803 299 SUPERFAMILY ARM repeat 19 181 IPR016024 -
Trre10g04803 299 FunFam Cell differentiation family, Rcd1-like containing protein 2 274 - -
Trre10g04803 299 Gene3D - 9 277 IPR011989 -
Trre10g04803 299 Pfam Cell differentiation family, Rcd1-like 14 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04803 Trre-Chr10 56351710 56355169 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre10g04803 Rcd1 5.9e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04803 K12606 - mof:131164386 309.301