Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04798 ATGTATATGCAGGTTGCAACATTAATACTTGAGAAAATTTTGTTAGATGATGATGGTTTGGCTTGTGTTTGTGCTAGACCAGAGCGGTTTTTGGCCGTCGGTCGAGTTTTGGACAAGGTGTTGGAAAATCTTGAATATCAACCATCAAATCGTCTTTTGAAGCATCTAATTCCATGCTATTCTCGTTTGTCACAAAATCGTTGGGCCGGCAATGCATTAAGAACCTCTCTTCCGAATGTGTTTGGAAAACCGACTTTCATTAACTCCCTTCGTGAAGACCCAGCAACTTGGATGTGGGCACAACAATTGTATGACAATGTTAGGGACAACCAAGTTCATCATGGAGGAGGAAACAATGATATTGTTGGATCGTCATCAGCATCCTAA 387 0.4109 MYMQVATLILEKILLDDDGLACVCARPERFLAVGRVLDKVLENLEYQPSNRLLKHLIPCYSRLSQNRWAGNALRTSLPNVFGKPTFINSLREDPATWMWAQQLYDNVRDNQVHHGGGNNDIVGSSSAS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04798 128 Gene3D - 1 112 IPR011989 -
Trre10g04798 128 Pfam Cell differentiation family, Rcd1-like 5 107 - -
Trre10g04798 128 PANTHER UNCHARACTERIZED 4 111 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04798 Trre-Chr10 56327609 56328453 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre10g04798 Rcd1 2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04798 K12606 - gmx:100792752 120.553