Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04778 ATGGTAGCACCAAGACCAAACACATTTATGCCGTTTGGAAACGGAGTCCACTCTTGTCCAGGAAGTGAAATGGCTAAGCCTCAGGAATATGTGCATGGCAATCAATTAAGCGGTTCTATTGTTAATAAGATGATTAAATTTGTGTTATCTGCAGGAATCTCTCTGCTAACAACTTCAAGGGGAATATACCGGTTGAGTTGGGTCACATCGTTAATCTTGGGACCTATCTAG 231 0.4156 MVAPRPNTFMPFGNGVHSCPGSEMAKPQEYVHGNQLSGSIVNKMIKFVLSAGISLLTTSRGIYRLSWVTSLILGPI 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04778 76 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 12 21 IPR017972 GO:0005506|GO:0016705
Trre10g04778 76 SUPERFAMILY Cytochrome P450 5 28 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04778 Trre-Chr10 56237495 56238121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04778 2 26 Cytochrome P450 AT5G45340 80.000 3.21e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04778 K09843 - thj:104800678 57.7658