Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04777 ATGACTAGTTTTCTCCTTGTTGCTCTCCTCTTACTGATCCCAATTCTCTTTCTGCTAAGCCTAAGAAGAACTAAACCATCCAAAAGGGTCCCTCCAGGTTCATTTGGAATTCCCATTATTGGTCAAAGTTTTGGCCTTCTTCGAGCAATGTACACCAACACATCAGAAAAATGGATTGAAGACAGAATCAACAAGTATGGTCCTATTTCAAAACTAAGCCTGTTTGGAAAACCAACTGTTTTTTTTCATGGACAGGCTGCAAATAAGTTTATATATGCCAATGGTGGTGACAGTATTGTTAACCAGCAATCACATCCCATTAAGATGTTATTAGGTGATAGGAACTTGCTTGAACTGAGTGGCAAAGATCATAGTAGAGTTAGAGGTGCACTTGTCTCATTCTTGAAGCCAGAATCTTTGAGACAATATGTTTCTAAAATTGATGAAGAAGTTAGGAGTCACATTCAGATGCATTGGGAAGGGAAACAACAGGTTAAGGCATTGCCTCTATTGAAGACTCTCACATTCAACCTAATTTGTTCCGTACTGCTTGGTATTGAGAATGGAAAACAAAGCGATCAATTCATCAATCCCTTCCAAGCAATGATGAGAGGAATGGTGTCTGTCCCAATTAATATACCCTTCACAAGCTACAACCGCAGCCTCAAGGCAAGCGCAAGGATCCAAAACATGTTGAAGGAGATTGTGCACCAGAAGACAGTTGAACAGGAGAAAAGTGGCGTCAATCCCCGTCAAGACTTAATCAGTTGCATGCTTAGCATGGTTGAAGATGACAAACAAGTTTTAACTGAGAAGGAAATCATCCATACTGCTATGCTTGTCATGGTTGGAGGATATGACACATCATCTGTTCTAATCACTTTCATTATCCGGGTCTTGGCTAATGAACCAGCTATTTGTGCAGCTGTTCTTCAAGAACAGGAAGAAATAGCGAAAGGCAAGCTTTTGGGAGAGCCTCTAACATGGGAAGACCTTTCAAAAATGAAGTACACTTGGAGAGTAGCATTGGAAACTCTTAGAATGTTTCCTCCAATCTTTGGCACATTCAGAAAAGTAGCTACAGATATTGAATATGGTGGATACATTATACCTAAAGGGTGGCAGATCTTCTGGGTTGCACCAACGACTCACATGGACAACAAAATTTTCCCAGAACCGTCAAAGTTTGATCCGAGTAGATTTGAAAACCAAGCATCTACACCACCCTATTGCTATGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGAAATGAGTTTGCTAGGGTTGAAACTCTGGTGGCAATTCATTACCTTGTGACTAAGTTCAGTTGGAAGCAACTTTCAGACAATTCTTTCAGCAGGGATCCAGTGCCAACACCAACTCAAGGCCTACTGATTGAACTTTGCTCAAGAAAACTATCTTAG 1428 0.4083 MTSFLLVALLLLIPILFLLSLRRTKPSKRVPPGSFGIPIIGQSFGLLRAMYTNTSEKWIEDRINKYGPISKLSLFGKPTVFFHGQAANKFIYANGGDSIVNQQSHPIKMLLGDRNLLELSGKDHSRVRGALVSFLKPESLRQYVSKIDEEVRSHIQMHWEGKQQVKALPLLKTLTFNLICSVLLGIENGKQSDQFINPFQAMMRGMVSVPINIPFTSYNRSLKASARIQNMLKEIVHQKTVEQEKSGVNPRQDLISCMLSMVEDDKQVLTEKEIIHTAMLVMVGGYDTSSVLITFIIRVLANEPAICAAVLQEQEEIAKGKLLGEPLTWEDLSKMKYTWRVALETLRMFPPIFGTFRKVATDIEYGGYIIPKGWQIFWVAPTTHMDNKIFPEPSKFDPSRFENQASTPPYCYVPFGGGARICPGNEFARVETLVAIHYLVTKFSWKQLSDNSFSRDPVPTPTQGLLIELCSRKLS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04777 475 SUPERFAMILY Cytochrome P450 25 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 FunFam Taxadiene 5-alpha hydroxylase 21 472 - -
Trre10g04777 475 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 Gene3D Cytochrome P450 21 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 Pfam Cytochrome P450 31 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04777 475 PANTHER CYTOCHROME P450 26 28 457 - -
Trre10g04777 475 CDD CYP90-like 62 469 - -
Trre10g04777 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04777 Trre-Chr10 56231746 56234280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04777 5 452 Cytochrome P450 AT5G45340 31.556 2.69e-73 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04777 - - gmx:100790001 722.235