Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04775 ATGAATAGTATTCTCCTTGTTGCTCTACTTTTACTCATCCCAATTCTCTTTCTGCTAAGAAGAACCAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAAAGTCTTGGCCTTCTTCGAGCGATGCGCGCCAATACAGCAGAAAAATGGATTGAAGACAGAATCAACAACAAACAGTCCATTAAGATGATATTAGGTGACAGGAACTTGTTGGAGCTGAGTGGCAAAGATCATAGTAGAGTTAGAGGTGCACTTGTCTCATTCTTGAAGCCAGAATCTTTGAAGCAATATGTTGCTAAAATTGATGAAGAAGTTAGGAGTCACATTCAGATGCATTGGGAAGGGAAACAGCAGGTTAAGGTATTGCCTCTAATGAAGACTCTCACATTCAACATAATTTGTTCCCTACTGTTTGGTCTTGAGAGTGGAAAACAAAGAGATCAATTCATGAATCCCTTCCAAGCAATGATTAAAGGAATGTGGTCAGTTCCAATTAATGCACCCTTCACACGCTACAACCGCAGCCTCAGGGCTAGTGCAAGGATCCAAAAGTTGTTGAAGGAGATTGTGAACCAGAAGAAAGTTGAACACGCAAAAAATGGTGCAAACTCCCACCAAGACTTAATCAGTTGCATGCTTAGCATGGTTGAAGATGACAAACAAGTCTTAACTGAGAATGAAATCATCCATAATGCTATGCTTGTCATGGTTGCAGGGCATGATACATCGTCTGTTTTAATCACTTTCATTATCCGGCTCTTGGCTAATGAACCAGCTATTTGTGAAGCTGTTCTTCAAGAACAGGAAGAAATAGCAAAAGGCAAGCTTTTGGGAGAGCCTCTAACATGGGAAGACCTTTCAAAAATGAAGTACACTTGGAGAGTAGCAAATGAAACTCTTAGAAGGTTTTCTCCCATCTTTGGTGGCTTCAGAAAAGCAGCAACAGATATTGAATATGGTGGATACATTATACCTAAAGGGTGGCAGATATTTTGGGTTACATCAATGACTCACATGGACAACAACATTTTCCCAGAACCAACAAAGTTTGATCCAAGTAGATTTGAAAACCAAGCATCTATTCCACCTTATTGCTTTGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGTTACGAGTTCGCCAGGGTTGAAATTCTTGTGTCAATTCATTACCTTGTGACCAAGTTCAGTTGGAAGCTACTCTCAGATAATTTTTTCAGCAGGGATCCAATGCCAACACCAACTCAAGGCCTACTGATTGAACTTTTCCCACGGAAACTATCTTAG 1308 0.4075 MNSILLVALLLLIPILFLLRRTKPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEKWIEDRINNKQSIKMILGDRNLLELSGKDHSRVRGALVSFLKPESLKQYVAKIDEEVRSHIQMHWEGKQQVKVLPLMKTLTFNIICSLLFGLESGKQRDQFMNPFQAMIKGMWSVPINAPFTRYNRSLRASARIQKLLKEIVNQKKVEHAKNGANSHQDLISCMLSMVEDDKQVLTENEIIHNAMLVMVAGHDTSSVLITFIIRLLANEPAICEAVLQEQEEIAKGKLLGEPLTWEDLSKMKYTWRVANETLRRFSPIFGGFRKAATDIEYGGYIIPKGWQIFWVTSMTHMDNNIFPEPTKFDPSRFENQASIPPYCFVPFGGGARICPGYEFARVEILVSIHYLVTKFSWKLLSDNFFSRDPMPTPTQGLLIELFPRKLS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04775 435 SUPERFAMILY Cytochrome P450 23 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
Trre10g04775 435 Gene3D Cytochrome P450 20 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS P450 superfamily signature 300 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS P450 superfamily signature 244 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 FunFam Taxadiene 5-alpha hydroxylase 61 432 - -
Trre10g04775 435 CDD CYP90-like 65 431 - -
Trre10g04775 435 Pfam Cytochrome P450 72 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS E-class P450 group I signature 253 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS E-class P450 group I signature 339 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS E-class P450 group I signature 233 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS E-class P450 group I signature 134 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04775 435 PANTHER CYTOCHROME P450 26 62 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04775 Trre-Chr10 56227668 56230049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04775 5 411 Cytochrome P450 AT5G45340 31.390 3.36e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04775 - - gmx:100790001 693.73