Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04750 ATGGATACCATTAAGCTCCAGTCTCGTTTCTCACTCGGCAGACAATCCTCACTCGCACCGGATCACCAAGATTCTGCCACCGTCAACGACTCGGTAAAGGAGCCGATTGATCCTCCGGTTCGGTTGATGTATTTAGCAAACGAAGGTGACTTAGAAGGAATCAACGAACTTTTAGACGGTGGCAGTGACGTCAATTTCAGAGATATTGACGGCCGCACCGCTCTTCACATCGCCGCATGTCAGGGACGCACCGACGTTGTTCAATTGTTGCTCCGAAGAGGTGCTGAAGTTGATCCTCAAGATCGTTGGTGCAGCACTCCTCTTGCTGATGCATTGTATTACAAGAATCATGATGTTGTTAAACTTTTGGAGCAACATGGTGCTAAACCTCCGGTGGCTCCTATGCATGTCCAGAATGCCCGGGAAGTCCCAGAATATGAGATTGATCCTTCTGAACTCGATTTTACAAATAGTGTTTGCATAACAAAGGGAACTTTCCGGAGAGCATTATGGCGTGGAATTCAAGTAGCCGTTAAAACTCTTGGGGAGGAAGTGTTCACCGATGACGAGAAAGTAAAGGCATTTCACGACGAGCTTACATTACTTCAGAAAGTAAGGCATCCAAATGTTGTCCAATTTTTGGGTGCCGTTACACAAAGTACCCCAATGATGATTGTCACAGAATATCTACCCCAGGGGGATCTTCGTGACTACTTGAAGCGGAAAGGTGCATTAAAACCGACAATAGCTGTGAAGTTTGCACTTGATATTGCTAGGGGGATGGGTTATTTGCATGAACATAAACCTGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATTCTCCGGGATGATTCTGGACATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTCACTCAAAATCACTAAAACAGTTAAAGAAGACAAACCTGTGACATGCGAGGATACCTCATGGCGGTATGTTGCACCAGAGGTCTACAGAAATGAAGAATATGACACCAAAGCGGATGTGTTTTCCTTTTCTCTGATATTACAAGAGATGATTGAAGGTTGTCCTCCATTTTATAGAAAGCCAGAAAAAGAAGTTCCTAAAGCATATGTGGAAAATGAGCGTCCACCATTCAGGGCTGCACCAAAGCTTTATGCTTATGGATTAAAAGATTTAATCGAGGAATGTTGGGATGGAGAACCATACCGAAGACCAACATTTAGGGAAATAATTGAGAGGTTGGATAAGATAAACCACCATCTTGCTCAAAAGAGGCGCTGGAAGGCTCTGGCTCCTTCATGCATCTGGAATCTGGAGGCCTTGTTTAAGGGGTATCCTACAAGTCCTGGTAGCCGATCATCTCGCTCTACGGTTAGATAA 1374 0.4447 MDTIKLQSRFSLGRQSSLAPDHQDSATVNDSVKEPIDPPVRLMYLANEGDLEGINELLDGGSDVNFRDIDGRTALHIAACQGRTDVVQLLLRRGAEVDPQDRWCSTPLADALYYKNHDVVKLLEQHGAKPPVAPMHVQNAREVPEYEIDPSELDFTNSVCITKGTFRRALWRGIQVAVKTLGEEVFTDDEKVKAFHDELTLLQKVRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRDYLKRKGALKPTIAVKFALDIARGMGYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKSLKITKTVKEDKPVTCEDTSWRYVAPEVYRNEEYDTKADVFSFSLILQEMIEGCPPFYRKPEKEVPKAYVENERPPFRAAPKLYAYGLKDLIEECWDGEPYRRPTFREIIERLDKINHHLAQKRRWKALAPSCIWNLEALFKGYPTSPGSRSSRSTVR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04750 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
Trre10g04750 457 SUPERFAMILY Protein kinase-like (PK-like) 161 413 IPR011009 -
Trre10g04750 457 SUPERFAMILY Ankyrin repeat 42 133 IPR036770 -
Trre10g04750 457 SMART ANK_2a 37 66 IPR002110 GO:0005515
Trre10g04750 457 SMART ANK_2a 70 99 IPR002110 GO:0005515
Trre10g04750 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Trre10g04750 457 PRINTS Ankyrin repeat signature 71 86 IPR002110 GO:0005515
Trre10g04750 457 PRINTS Ankyrin repeat signature 119 133 IPR002110 GO:0005515
Trre10g04750 457 Pfam Protein tyrosine and serine/threonine kinase 170 412 IPR001245 GO:0004672|GO:0006468
Trre10g04750 457 Gene3D Transferase(Phosphotransferase) domain 1 231 432 - -
Trre10g04750 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Trre10g04750 457 PRINTS Tyrosine kinase catalytic domain signature 227 240 IPR001245 GO:0004672|GO:0006468
Trre10g04750 457 PRINTS Tyrosine kinase catalytic domain signature 266 284 IPR001245 GO:0004672|GO:0006468
Trre10g04750 457 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Trre10g04750 457 PRINTS Tyrosine kinase catalytic domain signature 337 359 IPR001245 GO:0004672|GO:0006468
Trre10g04750 457 MobiDBLite consensus disorder prediction 14 34 - -
Trre10g04750 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Trre10g04750 457 Gene3D Phosphorylase Kinase; domain 1 147 230 - -
Trre10g04750 457 PIRSF ILK 2 434 - -
Trre10g04750 457 CDD STKc_MAP3K-like 161 412 - -
Trre10g04750 457 FunFam Os01g0748600 protein 141 432 - -
Trre10g04750 457 FunFam Integrin-linked protein kinase family 18 146 - -
Trre10g04750 457 Gene3D - 8 145 IPR036770 -
Trre10g04750 457 ProSiteProfiles Protein kinase domain profile. 155 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04750 457 MobiDBLite consensus disorder prediction 14 30 - -
Trre10g04750 457 FunFam serine/threonine-protein kinase STY46-like 148 231 - -
Trre10g04750 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 105 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04750 Trre-Chr10 56071384 56077940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04750 7 435 MAP Kinase Kinase Kinase AT4G18950 66.129 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Trre10g04750 PK_Tyr_Ser-Thr 5.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04750 - - gmx:100795964 756.133