Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04744 ATGGAATTCTTCAATGCTCAAAGGAGAAACAAATTGTATGAAGAATTTGTTCATCCTCGAATTTCGAAACACGGAAAAATCTTCAAAACAAGGATCATAGGTTCACCAACTGTGATTGTAAATGGAGCTGAAGCCAATAAATTTATTCTATCTAATGAATTTAAGTTGGTAAAAAGTTCTTGGCCTTCTTCCTCAGTTCATCTCATGGGAAAAGACTCAATCATGGAGAAAGATGGCGAAAGACACCGTTTTCTTCGCGGTGTTATCGGCACTAGTCTTGGCTATGCTGGACTTGAAACATTAGTTCCAAAATTATGCAACTTTGTTCAATTATATTTATCTAAAAACTGGCGTGGTCGAGAAGAGATTAGTCTCTACCGTTCAACGAAAGTTCTTACATTTAGCATAGTTTTCGAGTGTTTGTTAGGTATCAAAGTCGAACCGGGTATGGTAGATACATTTGAGAGAGTTTTGGAAGGAGTTTTCTCTCCAGCAATTAAGTTTCCAGGTTCTAAATTTTGGAGAGCAATGAAAGCTAGAAAGGAGATAGAAAAGGTGATAATGAAAGTGGTGAGAAAAAAGAGAAAGGAAATAGAAGAAGGAAGGTTCAAAAGAGAGGAAGATACAATGCTAATGTCTAAATTGGTATATGGAATGATCCAAGGAGAGATTACTGAAAAAGAGATTATAGATAATGTGGTTTTGCTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCAATGACTTTCAAGATGCTTGCTCAACATCCTGATTGCTATGGCAAAGTTCTACAAGAACATGTTAATATAATGAGAAACAAAGGAAGGGGTGAGAGTCTCAATGTAGAAGATATAAAGAAGATGAAATATACATGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCAATATTTGGTTCTTTCAGGAAGGCAATCACTGATATTGAATATGAAGGATTCACTATACCTAAAGGATGGAAGGTGCTATGGACAACATATGGGACACATTACAATGAAAATTATTTTAAAGATCCTTTAACTTTCAATCCAAGTAGGTTTGAAGAAGGAATAGCACAATATACATTTGTTCCCTTTGGAGGAGGGCCAAGAGTGTGTGCAGGGTTAGAGCTGTCAATTTAA 1149 0.3621 MEFFNAQRRNKLYEEFVHPRISKHGKIFKTRIIGSPTVIVNGAEANKFILSNEFKLVKSSWPSSSVHLMGKDSIMEKDGERHRFLRGVIGTSLGYAGLETLVPKLCNFVQLYLSKNWRGREEISLYRSTKVLTFSIVFECLLGIKVEPGMVDTFERVLEGVFSPAIKFPGSKFWRAMKARKEIEKVIMKVVRKKRKEIEEGRFKREEDTMLMSKLVYGMIQGEITEKEIIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYGKVLQEHVNIMRNKGRGESLNVEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPKGWKVLWTTYGTHYNENYFKDPLTFNPSRFEEGIAQYTFVPFGGGPRVCAGLELSI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04744 382 PANTHER CYTOCHROME P450 26 14 381 - -
Trre10g04744 382 PRINTS E-class P450 group I signature 334 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS E-class P450 group I signature 21 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS E-class P450 group I signature 375 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS E-class P450 group I signature 228 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS E-class P450 group I signature 248 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS P450 superfamily signature 239 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS P450 superfamily signature 375 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 PRINTS P450 superfamily signature 295 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
Trre10g04744 382 Pfam Cytochrome P450 12 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 SUPERFAMILY Cytochrome P450 12 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 Gene3D Cytochrome P450 1 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04744 382 FunFam Taxadiene 5-alpha hydroxylase 1 382 - -
Trre10g04744 382 CDD CYP90-like 20 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04744 Trre-Chr10 56008721 56010671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04744 1 331 Cytochrome P450 AT2G42850 65.361 2.72e-150 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04744 - - gmx:100793336 634.409