Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04737 ATGGACTTTTTCTCGGATTATGGTGATGCCAACCGGTATAAAATTCAAGAAGTAATTGGGAAAGGTAGTTATGGCGTTGTTTGTTCAGCTGTTGATACTCATACTGGTGAGAAAGTTGCAATTAAAAAGGTTCATGGTATCTTTGAGCACATATCCGACGCTGCACGTATTCTTCGTGAGATAAAGTTGCTCAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCACATTATGTTGCCTCCTTCAAGCAGAGAATTCAAAGATATTTATGTTGTTTTTGAGCTTTTGGAATCTGATCTGCATCAAGTCATTAAAGCCAATGCCGACTTAACAAAAGAGCACTATCAGTTTTTTCTTTATCAGTTACTTCGAGCATTGAAGTATATTCACACCGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAGTGACACTCCAACAACTGTATTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCACCCGAGCTCTGTGGATCATTTTACTCAAAGTATACGCCGGCAATTGATATTTGGAGTATAGGATGCATCTTTGCTGAAGTATTGATAGGAAAACCACTTTTCCCCGGAAAAAGTGTTGTGCATCAGTTGGATCTGATCACAGATCTGCTTGGAACCCCCTCAATGGATACTATATCTCGGGTACGCAATGATAAAGCAAGGAGATACCTAACTAGTATGAGGAAAAAGCAGCCTATACCATTTGCACAAAAATTTCCTAATGCAGATCCTTTATCACTACGGCTACTGGAAAGGTTGCTCGCATTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCAAAAATTGAAAGAGAACCATCCTGCGAGCCCATTACACAAATGGAGTTTGAATTTGAAAAGAGAAGAGTAACAAAGGGAGAAATCCGAGACTTGATTTTCCATGAGATTCTAGAGTACCATCCTCAACTAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTTGACAAGCAGTTTACTCATCTTGAGGAGACTGGTGGTAAAAGTGATCCTGTTGTGCCACTTGAAAGAAAACATGCATCTCTTCCCAGGTCAACAATCGTACATTCAAATATGACACCCCAAAAGGAGCATTCGAATATTGCTTCCAGTAAAAACCGGCAAATAACTGAGGAATATAATACTAAATATACGGAATCCAGCGGCATCCGGGGACTGCAAATAATTCCACTGGAAACACCTGGTAAAGTTGTTAGGCCAGTTGTTAAATATGAGCATGGGAGTATTGTCAATGATTCATATGATTCCAGAACATCAATAAGAGGCAAAACATATCCAACGGTGTTGAATCAAGGCCGAAGTAGCATCAAGTTTAACCATAAGTATTGA 1488 0.3945 MDFFSDYGDANRYKIQEVIGKGSYGVVCSAVDTHTGEKVAIKKVHGIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSREFKDIYVVFELLESDLHQVIKANADLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKSVVHQLDLITDLLGTPSMDTISRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLSLRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCEPITQMEFEFEKRRVTKGEIRDLIFHEILEYHPQLNGTERTNFLYPSAVDQFDKQFTHLEETGGKSDPVVPLERKHASLPRSTIVHSNMTPQKEHSNIASSKNRQITEEYNTKYTESSGIRGLQIIPLETPGKVVRPVVKYEHGSIVNDSYDSRTSIRGKTYPTVLNQGRSSIKFNHKY 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04737 495 ProSitePatterns MAP kinase signature. 48 151 IPR003527 GO:0004707|GO:0005524|GO:0006468
Trre10g04737 495 SMART serkin_6 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04737 495 ProSiteProfiles Protein kinase domain profile. 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04737 495 Gene3D Phosphorylase Kinase; domain 1 28 350 - -
Trre10g04737 495 SUPERFAMILY Protein kinase-like (PK-like) 9 308 IPR011009 -
Trre10g04737 495 FunFam Mitogen-activated protein kinase 4 107 - -
Trre10g04737 495 Pfam Protein kinase domain 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04737 495 Gene3D Transferase(Phosphotransferase) domain 1 99 327 - -
Trre10g04737 495 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 353 - -
Trre10g04737 495 ProSitePatterns Protein kinases ATP-binding region signature. 19 43 IPR017441 GO:0005524
Trre10g04737 495 CDD STKc_TDY_MAPK 12 349 - -
Trre10g04737 495 FunFam Mitogen-activated protein kinase 99 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04737 Trre-Chr10 55953237 55957888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04737 1 419 MAP Kinase Gene Family AT2G42880 84.670 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trre10g04737 Pkinase 4.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04737 - - tpra:123882256 934.095