Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04706 ATGGCTAATGAGAATCATAATCCTTTCTATCATCACAACCACCATGATGATGAACTCAATCACTCAAACTTTTCATTCTCACAAAACTTTCAAGGATTTGATCCTTCTTCTCATAGTACAAGTTTCACTGACTACTTACATGGTTCCATGGATTATAACACTCTCTCAAAAGCCTTTGATTTGTCTTGTTCATCATCTGAAATAAATATTTCTTCCATTGATGACAACAATACAAAGAAATCTAGTGTAGGAATTAGTGAGACACTAAATTCCTCAGAATCATCATCATCTAATGAAGCTGTTGTACAAGAAGATTCAGCCAAAAACAACAAGAAAGATAAGCAACCAAAATTAGAGTGTGAAGATGTAGATGATGAAAAGTCTAAGAAAGAGAAAGAGAATAAGGCTAAAAAGAAAGAGAAAAAGCCAAAAGAGCCAAGATTTGCCTTCTTGACTAAAAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGCAGTCAAGAATAGTCCGTACCCAAGGAGCTATTATAGATGTACAAGTCAGAAGTGCATTGTGAAGAAAAGAGTGGAGAGATCATACCAAGATCCAACAATTGTGATGACAACATATGAAGGACAACACAATCATCATTGTCCAGCAACACTAAGAGGTAATGCTTCCTCCATGTTTTCATCACCATCCCTCTTTGCTCCAACATCAATGGGATTGGAACAAAGATTGCACCAAGATTTTCTTGCTCAGTTTCTTCCAAGTTACACCCAACAAAGTGATATTCAACAGCAAATGTTCCACCAAAATCTTCCACAAATATTACCTCATCATCAACACCAACAACAACAGCAGCAACAACAACAGTTTCAACATCATCATGACTATGGTTTGTTACAAGATCTACTACCATCATCATTTCCAGGAAAACAAGAGCCATGA 951 0.3596 MANENHNPFYHHNHHDDELNHSNFSFSQNFQGFDPSSHSTSFTDYLHGSMDYNTLSKAFDLSCSSSEINISSIDDNNTKKSSVGISETLNSSESSSSNEAVVQEDSAKNNKKDKQPKLECEDVDDEKSKKEKENKAKKKEKKPKEPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPTIVMTTYEGQHNHHCPATLRGNASSMFSSPSLFAPTSMGLEQRLHQDFLAQFLPSYTQQSDIQQQMFHQNLPQILPHHQHQQQQQQQQQFQHHHDYGLLQDLLPSSFPGKQEP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04706 316 FunFam WRKY transcription factor 57 145 219 - -
Trre10g04706 316 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g04706 316 MobiDBLite consensus disorder prediction 70 104 - -
Trre10g04706 316 MobiDBLite consensus disorder prediction 70 146 - -
Trre10g04706 316 MobiDBLite consensus disorder prediction 105 146 - -
Trre10g04706 316 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g04706 316 Coils Coil 120 140 - -
Trre10g04706 316 Gene3D WRKY domain 144 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g04706 316 SUPERFAMILY WRKY DNA-binding domain 152 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g04706 316 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g04706 316 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 291 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04706 Trre-Chr10 55740029 55742582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04706 27 224 WRKY Transcription Factor Family AT4G18170 53.695 8.86e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre10g04706 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04706 - - aprc:113847247 346.28