Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre10g04705 | ATGTCATCCAAGAACTCTTTGGATGTGGAATTGTCGAAGACGTCCTTTTTGGGTTTGCAAAGATGGGTTTTGATTGGGATAGGTTTTGGTGCATTTATAGTGGTGATTCTTTGTATATTGTCTATATGGGTGCTGTTTCGGAGGAAGTCTAGGGGTAGGAGATCTTTGGACACGTCCCAAATACCGAATGTGTCGAAAGATATCAATGTTGACAAGGTTGGTGTGCAGAATTCTCATGTTCAACATGGAAATATGTTTGTTCCTGATGATAATAATTCGGACAAGATATCGATTCATATGAGGACGAGTAAACACAGTGATCCTGATAGTGCAAGTCATTGCAGTTCAGTTTATCATCACGAGAGAGGATTGAGTGCGCTTTCATGGGAAGAAGGGAGCTCTGGGAATTATAAGAAGCAGTCTACATTGTCATATGGAGGAGGGCCAATGGCTTCTCCCTCTCCTTTGATTGGTTTGCCGGAATTTTCTCATCTTGGTTGGGGCCACTGGTTTACACTTAGAGATCTTGAACAAGCAACCAATTGTTTCTCGGCTGAGAACGTTCTCGGTGAGGGTGGATATGGAGTTGTTTACAAGGGAAGACTGATCAACGGAACCGAGGTAGCAGTGAAGAAACTTCTTAACAACTTGGGTCAAGCAGAGAGAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTTGTGCGCCTGCTTGGATATTGCGTAGAAGGAGTTCACAGGCTGCTGGTGTACGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGCGACAAGTACCAACTTGGGACACTTACCTGGGAGGCCCGCATGAAAGTTATACTTGGCACAGCCAAAGCGCTTGCTTACTTACATGAAGCGATTGAGCCAAAAGTTATTCACCGGGATATAAAGTCTAGCAACATATTGATCGATAATGAGTTCAATGCAAAGGTTTCTGATTTCGGTTTGGCCAAACTTTTGGAATCAGGAGAAAGTTACATAACTACTAGAGTAATGGGAACCTTTGGTTACGTAGCACCAGAATACGCCAACAGTGGTTTGTTAAATGAGAAGAGTGATATTTACAGCTTCGGTGTCCTCTTGCTGGAAGCGGTTACCGGCAGGGACCCTGTAGACTATGCGCGTCCTTCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGGCAAGGAGAGCCGAGGAAGTTGTGGACTCGAGCATTGAAGTTAAACCATCTGCACGTGCTTTAAAACGTTCCCTTCTAGTTGCACTTAGGTGTATTGATCCTGATGCTGACAAAAGGCCTAAAATGAGTCAAGTTGTTAGGATGCTTGAAGCTGATGAATATCCATTTCGAGAGGATCGAAGGAATAGAAAGAGCACGACTACCAGCTTCGAAATTGAAACGGTGAAGGAAATTTCTGATCAAGGTGATGTTGAAAAGGCGGAGCATGTGCCAGAAACAACTCAAGGAAAGGATTGA | 1512 | 0.4358 | MSSKNSLDVELSKTSFLGLQRWVLIGIGFGAFIVVILCILSIWVLFRRKSRGRRSLDTSQIPNVSKDINVDKVGVQNSHVQHGNMFVPDDNNSDKISIHMRTSKHSDPDSASHCSSVYHHERGLSALSWEEGSSGNYKKQSTLSYGGGPMASPSPLIGLPEFSHLGWGHWFTLRDLEQATNCFSAENVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEREFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDKYQLGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDNEFNAKVSDFGLAKLLESGESYITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPSNEVNLVEWLKMMVGARRAEEVVDSSIEVKPSARALKRSLLVALRCIDPDADKRPKMSQVVRMLEADEYPFREDRRNRKSTTTSFEIETVKEISDQGDVEKAEHVPETTQGKD | 503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre10g04705 | 503 | MobiDBLite | consensus disorder prediction | 481 | 503 | - | - | |
Trre10g04705 | 503 | ProSitePatterns | Protein kinases ATP-binding region signature. | 189 | 212 | IPR017441 | GO:0005524 | |
Trre10g04705 | 503 | Gene3D | Transferase(Phosphotransferase) domain 1 | 259 | 472 | - | - | |
Trre10g04705 | 503 | ProSiteProfiles | Protein kinase domain profile. | 183 | 462 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre10g04705 | 503 | Pfam | Protein kinase domain | 185 | 452 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre10g04705 | 503 | SUPERFAMILY | Protein kinase-like (PK-like) | 163 | 456 | IPR011009 | - | |
Trre10g04705 | 503 | SMART | serkin_6 | 183 | 454 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre10g04705 | 503 | Gene3D | Phosphorylase Kinase; domain 1 | 165 | 258 | - | - | |
Trre10g04705 | 503 | CDD | STKc_IRAK | 189 | 455 | - | - | |
Trre10g04705 | 503 | PANTHER | OS01G0323000 PROTEIN | 1 | 478 | - | - | |
Trre10g04705 | 503 | FunFam | Putative receptor-like protein kinase | 165 | 258 | - | - | |
Trre10g04705 | 503 | Coils | Coil | 203 | 223 | - | - | |
Trre10g04705 | 503 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 305 | 317 | IPR008271 | GO:0004672|GO:0006468 | |
Trre10g04705 | 503 | FunFam | Putative receptor-like serine/threonine-protein kinase | 259 | 469 | - | - | |
Trre10g04705 | 503 | MobiDBLite | consensus disorder prediction | 462 | 503 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre10g04705 | Trre-Chr10 | 55731877 | 55734444 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre10g04705 | 160 | 457 | Trihelix Transcription Factor Family | AT1G70460 | 49.505 | 9.17e-93 | 295 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-V | Trre10g04705 | Pkinase | 5.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre10g04705 | - | - | gmx:100798916 | 807.364 |