Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04681 ATGGTTGCTCATCAGAATAGATTTGGTTCGGAAAAAATAAAAGCATGGACAGCAGCATTGTCTGAAGTGGCAGACTTGAAAGGTCACCCTATCAACACGGGGCCCGAAATCATTCATGTTAAAGAGATTGCCGAAAAGGTCCATGCTAATATAGCACCTAAACCTTTACTTGGTGGTGAGAAACCAGTTGGACTTGATCAACGCATAGAAGAGGTGAAGTCGCTTCTAGAATCCGCCAATGATTCTGGAAGTGATGCAATTCAAGGGATAATGCTTGATCCTCCCCAACGTATAACAGATGTAGATTGGAATGATACTACTTTTGAGAAGATGAACCGTCTGAGAATTCTCATTGTTCGACATACAACCTTTTCATCAGAGACTAAACATCTTCCAAACTATTTAAGGCTACTTGACTGGGATGTATACCCTTCAAAGACTTTTCCACCAAAATTTTACCCAAGGAATATCATCATCTTAAATTTGCCTAATAGTCAACTTACAATGGAAGAGCCATTTAAGAAATTTTCAGATCTCATTGTCATGAATTTCTCCAATAATCAATCTATCACAGCAATGCCTGATTTGTCAAAAATTGAAAAGTTGAGAGAATTGCGACTTGATGATTGTGAGAACTTAACTGCAGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCATTTCGGGATGCACCAAACTTGAAAATTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTCTTTAACCTTAATTCGTGTGAAAAACTTGAACACTTCCCAGATATAGAGAAAGAGATGAATACACCATTGAAGATTCGTATGATGAGTACCTCTATTAAGAAGCTGCCAAATTCTGTTGGTAATCTTATTGGACTTGTTTCAATAGACATGGAAAACAACAAGAAACTCGAAGATCTACCAAGTAGCTTATTTAGGTTACCAAATGTTGTTGCTTTTGACTTTGGAGGTTGTTCTAAACTTGGTGGATCTTTCAGAAGATTTCTACCTGATAGCCCGTCAGAAGCCAATGAACGTTCAACATTAAAAACAATTGATATTGCGAATTGTAGTTTGTTAGAGGAAGATATTCAAACAATTCTCATATGTTTTCCAAAACTGGAAGAATTGATTGCACCATGTAACAATTTCGTCTCTATCCCATCGTGCATTAAAGAGTTTGATCACTTGACAAATCTTGATGTTAGTGATTGCAAAAAGCTTAAAGAAATTCCTGAATGCACCAACTTAAGAATTTTGAATGTCAATGCTTGTACAAGTCTTACACACATTCCAGAGTTGCCATGCAGTATTAAAAAAATAGATGCAAGATATTGCTTCAACTTATCTTCGGAGACATCAGACATGATATGGGATCTGGTGAAAAAAGAGGGGCATGTGTTTGAAATTGTGATGCCTGGAGTCGAGGTTCCAAAATGGTTTAATTATATACGCAAAGATGAAATTCTGTGTTTTTGGGTTCGTGAGAAATTTCTCAATGTTTCTTTAGCATTGGTGTTCAAATATGCGGATGGGAAGGAAAGAGTAAATCAGAATCTTGTTCACCTTCGTTTGGTTATCAACGGTCAATTAGTCCCTCACAAAGACTATAAAAACTTCATAATTGAACCACATCATGTTTTAGTTTGTGATCTACGACGCTTATACAATGACGAGGAGTGGTTAAGTATTGATGCATTACTTCTAAAGCATGAATGGAACCAAGTGCAAATTTCATATGATTTCCGAAACAGTCACGTGACACTAAGTGAATGGGGAGTTTTTGGATACAAACAAGGAACTGATAACTTGAATGAACTGTCGGATGCATTGTCTGAAGTGGCAGACTTTGAAGGTCACCACATCCACACTGGGCACGAAATTGATCATGTTAAAGAGATTGCCAGAAAGGTCGGCGCTATTATAGCTCCTATACCTTCATTTGTTAAGTATCCGGTTGGACTTGATCAACACATAGAAGAGGTGAAGTCACTTCTAGACTTGAAGCCAAATGACAATACTGTAAGCGTTTTGAGCATAGTTGGAGTTGGCGGAATAGGGAAAACTGAACTTGCCAAAGCATTAGAGATTGTTAGGCAAGAGGCACCAAATAATCCTGCAAAATTTAATCCGATGAAAGTCATCATCTTAAGTTTGCTTGATAGTCAACAAATTACAATGGCAGAGCCATTCAAGCAATTTTCATATTTGACTGTCATGAATTTCTTAAGTAATCGATTTATCACAACATTTCCGGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATAATTGTTGGAGTTTAACTACAGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCATTTCGAAGTGCTATGACCTTGAAAATTTTCTGGAGAGAATGTTTTTACCATCTCTAGAAGTCCTTGAACTTGATCGGTGTTACAAAATTGAACACTTCCCAGATATAGAGAATGAGATGAATACACCATTGAGGATTTATATGACGCACACCTCTATTAAGAAGCTGCCAAATTCAGTTGGTAAACTTATTGGATTTGTTTCAATGGACATGCAATATAGCGAGAATCTCGAATATCTACCAAGTAGCTTATTCAAGTTACCAAATGTTGTTGCTTTTAACTTTGGAGATTGTTCTAAACTTGGTGGATCTTTCAGAAGATTTCTACCTGATAGCCCGTCAGAAGCCAATGAACGTTCAACATTAGAAACAATTGATATTGCGAATTGTAGTTTGTTAGAGGAAGATATTCAAACAATTCTCATATGTTTTCCAAAACTGGAAGAATTGAATTACATTCATTTGATGGCAACATTGAATCAATGCCAACCTGCTGCAAATCTTGATAGTTCTATAGTATGTCTGCCGTGCTGTAACGAGAACATTTTGTTCAAAAGATGA 2934 0.3664 MVAHQNRFGSEKIKAWTAALSEVADLKGHPINTGPEIIHVKEIAEKVHANIAPKPLLGGEKPVGLDQRIEEVKSLLESANDSGSDAIQGIMLDPPQRITDVDWNDTTFEKMNRLRILIVRHTTFSSETKHLPNYLRLLDWDVYPSKTFPPKFYPRNIIILNLPNSQLTMEEPFKKFSDLIVMNFSNNQSITAMPDLSKIEKLRELRLDDCENLTAVHESIGFLKHLVHLSISGCTKLENFLQRMFLPSLEVFNLNSCEKLEHFPDIEKEMNTPLKIRMMSTSIKKLPNSVGNLIGLVSIDMENNKKLEDLPSSLFRLPNVVAFDFGGCSKLGGSFRRFLPDSPSEANERSTLKTIDIANCSLLEEDIQTILICFPKLEELIAPCNNFVSIPSCIKEFDHLTNLDVSDCKKLKEIPECTNLRILNVNACTSLTHIPELPCSIKKIDARYCFNLSSETSDMIWDLVKKEGHVFEIVMPGVEVPKWFNYIRKDEILCFWVREKFLNVSLALVFKYADGKERVNQNLVHLRLVINGQLVPHKDYKNFIIEPHHVLVCDLRRLYNDEEWLSIDALLLKHEWNQVQISYDFRNSHVTLSEWGVFGYKQGTDNLNELSDALSEVADFEGHHIHTGHEIDHVKEIARKVGAIIAPIPSFVKYPVGLDQHIEEVKSLLDLKPNDNTVSVLSIVGVGGIGKTELAKALEIVRQEAPNNPAKFNPMKVIILSLLDSQQITMAEPFKQFSYLTVMNFLSNRFITTFPDVSKVENLRELRLDNCWSLTTVHESIGFLKHLVHLSISKCYDLENFLERMFLPSLEVLELDRCYKIEHFPDIENEMNTPLRIYMTHTSIKKLPNSVGKLIGFVSMDMQYSENLEYLPSSLFKLPNVVAFNFGDCSKLGGSFRRFLPDSPSEANERSTLETIDIANCSLLEEDIQTILICFPKLEELNYIHLMATLNQCQPAANLDSSIVCLPCCNENILFKR 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04681 977 SUPERFAMILY RNI-like 730 943 - -
Trre10g04681 977 Gene3D Ribonuclease Inhibitor 833 954 IPR032675 -
Trre10g04681 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 649 698 IPR027417 -
Trre10g04681 977 Gene3D - 639 712 IPR027417 -
Trre10g04681 977 PRINTS Disease resistance protein signature 680 695 - -
Trre10g04681 977 PRINTS Disease resistance protein signature 908 924 - -
Trre10g04681 977 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 86 266 IPR044974 GO:0006952
Trre10g04681 977 SUPERFAMILY L domain-like 103 452 - -
Trre10g04681 977 Gene3D Ribonuclease Inhibitor 716 832 IPR032675 -
Trre10g04681 977 Gene3D Ribonuclease Inhibitor 276 466 IPR032675 -
Trre10g04681 977 Gene3D Ribonuclease Inhibitor 97 275 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04681 Trre-Chr10 55528077 55536623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04681 709 903 WRKY Transcription Factor Family AT4G12020 31.527 3.40e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04681 - - tpra:123882301 660.218