Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04680 ATGGCAAATTATGAAGAACAATCACATGACTCAGAAAAAGTAAAAGCATGGACAGCAGCATTGTCTCAAGTGCCAAACAAGAAAGGTCACCACTATCATATCCACAAGGGGAACGAAATCGATCATGTTAAAGAGATTGCCGAAAAGGTTCATGCTAAGATTGCTCCTAAACCTCTACTTGTTGGTGAGAAACCAGTTGGACTTGATCAACAAATAGAAGAGGATATGGGTCGAGAGATTATTAGGCAAGAGGAACCGAATAATCCCGCAAAACGTAGTAGATTATGGCTTCAAGAAGAAGTCATTAATGTATTATTGGCCAATGATACTGGGAGTGATGCAATTCAGGGGATAGTGCTTTATCCTCCAGAACGTATAACAGATCCTAAACATCTTCCAAATTATTTAAGGCTACTTGACTGGAAGTTTTACCCTTCGAAGACTTTCCCACCAAAATTTTATCCGAAGGATGTCATCATCTTAAAGTTGCCTAATGGTCGACTTAAATTGGAAGAGCCATTTAAGCAATTTTCATGTCTGACTGTCATGAATTTCTCAAATAATAAATATATCACAACAATGCCCGACGTGTCCGAAGTTGAAAATTTGAGAGAATTGCGACTTGATTATTGTTTGAACTTAACCATGGTTCATGAATCCATTGGATCTCTCAAAAATCTTGTCCACTTTAGCGCTTCGGAATGCAAAAAACTTGAAATCTTTTTGAGAAGCATGTTTTTACCATCTCTAGAAGTCCTTAATCTTGATTGGTGTGAAAAACTTGAACATTTCCCAGAGATAGAGAACAAGATGATTAAACCATTGAAGATTCATATGATAGGTACCTCCGTTAAGAAGCTGCCAAATTCAGTTGGTAATCTTACTGGACTTGTTTCAATGGACATGCAATATAGCGAGAATCTCGAATATCTACCAAGTAGCTTATTCAAGTTACCAAATGTTGTTGCTTTTGACTTTGGAGGTTGTTCTAAACTTGGTGAATCTTTCAAAATATTTCTACCTCATAGCCCTTCAACATTAAAAAAATTGCATTTTGAAGAAAGTGGTTTGTCAGATGAAGATGTGCAGGCAATTCTCACATGTTTTCCAAAATTAGAAGAATTGATTGTATATAAAAATAATTTGGTCTCTCTGCCAGCTTGCATTAAAGAGTCTACTCACTTGGCAAATCTTGATGTTAGTGATTGCAAAAAGCTTAAAGAAATTCCTGAATGCACCAACTTGAGAATTATGAATGTCCATGGTTGTATGAGTCTTACACACATTTCTGAGTTGCCATGCACTATTAAAAAAGTAGATGCAAGAAAATGCTTCAACTTTTCTTCAGAGACGTCAAACATGCTATGGGATCAGGTGAAAAAAGAGGGGCATGTGTTTGAAATTGTGATGCCTGGAGTCAAGGTTCCAAAATGGTTTAATTATATACGCAAAGATGAAATTCTGTGTTTTTGGGTTCGTGGGAAATTTCCCAATGTTTCTTTAGCATTGGTGTTCCAATATGCGGATGGGAAGGAAAGAATAAATCAGGATCTTGTTCAACTTCATTTGGTTATCAACGGTCAATTAGTCCCTCACAAAGACTATAACAACTTCATAATTGAACCGCATCATGTTTTAGTTTGTGATCTACGACTCTTATACAATGACGAGGAGTGGTTAAGCATTGATGCATTACTTCAAAAGCATGAATGGAATCAAGTGCAAATTTCATATGAATTCGAGTACAGTCACGTGACACTAAGTGAATGGGGAGTTTTTGTGTACAAACAAGGAACTGATAACTTGGAAGCTGTTAACTTGAATGAACAGTCGGATGATCTGTGGGAGATGCTTGAAGCCGCAAAAGGTGAGGAGCAAGAAAACAATGAATGCAATTTGAATGAGACAGTAAAGAATGATGAAGAGCTGATGGAGATTGGCAACAATAATTCATCGGAGCAGTCAGAACGAAAACTTCCGGCGACCACTACGGTACCATCAGTTATGGAATTCATAGCACAACCAAACTCAGAGTGTCACAAGGAATCAGTGACTGGGTCGTACGTGATGTTCGAAACAGAAGCGTCGGGGAAGATGAAGATCAAAGGGTCGGATGAAGAGACCACGACTGTGGAGGATCCAAACCTCTTCAAGGAGGAAGAGTGTTCACAAACAAGAGGGGATCAAGGGACTATTCTCGACCCAGAACCACCGTCGGAGCCACCGTATGATGATCATCGAGTGGTAAGCATTCAACAATCAGAAACAATCGATGACGAAATTGGGTTGTCGATGACGAAATCACCATGGGTTCAACCTACCGGTGAGCAAGCTTTGTTGAAGGAGGAAGTAAGATTGCAGAAGATCCAAGTGATGCGTCTCTTGGTCACTATCGCACCGCCGGCTAAATCGCCGTATTCCGTTAAACCTTCGACGGTGCTCCCACAGAGAGGACCACCGCCGGAACCACCAGACCTTGCAACCATGGGGTGGATATTGGCGAAGTCACCGCGTATGGAGGTGGGGAGCTTTAGAATCTCAACAGAATTATTCGGTGTTGATCAGCAAGCAATGAATGGGGAACATAATTGTGTAGCCTTTGAAGGAAAAGCACACAGTGGTCTGTGTTTAAAATTTAAGTCGTATTTTAGTTGGTGTGATTCACTAGCTAATGAGTCTGTTGTCTCACTAATTTACTGGCTGATACAAGAAAGTTCTACATGTTGGAAGTATACCTTGATGCCTACGGTTACGGTGGCAATAATGATGCCAAATCCGGAAGCTCTAGACTATGTTTTTCGCAAGCAAGTGAATTTCTTCAACAAAGACAGTGGTATGCAACTCAGAGGGCAAGTCGGCAATAATGTAAGCTTTTATGTCCTGCCAATCTCAGCTGTTTATTCGGGGTGGCAAACACTAAAGTTTTGGATCCTTAAAATTGAAGAAAGGAAGCTCAATAGTCTTTCTATAAAGGCGATGAAGTTCATACTCCTTGTTATCAATGGAAAATATAGAGATAAGGAAATAGCATCCTCACTGCACGAAATCGATCATGTTAAAGAGATTGCCGGAAAGGTCGGCGCTAATATAGCTCCTAAACCTCTACATGTTGGTGAGAATCCAGTTGGACTTGATCAACGCATAGAAGAGGTGAAGTCACTTCTAGACTTGAAGCCAAAGGACAATACTGTATGCTTTTTGGGCATAATTGGAATTGGCGGAATAGGGAAAACTGAACTTGCCAAAGCATTGTATAACGAAATTGTTCACCAATTTGTAGAAGCAAGTTTTCTTGCCAATGTTAGAGAGAAGTTGAAGAAAATCAATGGCCTGAAAGATCTAGAGAAGCAATTAGAAAAACACATGCTTGGAAGGAAAAATGTTCTTTTGGTACTTGATGATGTTGATGAGATACCAGGAAACTTGAATATGGGTAGAGAGATTGTTAGGCAAGAGGCAGCAAATAATCCTGCAAAATTTAATCCGATGAAAGTCATCATCTTAAGTTTGCTTGATAGTCAACTAATTACAATGGAAGAGCCATTTAAGCAATTTTCATGTCTGACCATCTTGGATTTCTCACATAATCAATTTATCGCAACAATGCCTGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATTATTGTTCCAACTTAACTACAGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGTTTCGGAATGCCATCAACTTGAAAATTTTCTGCAGAGAATGTTTTTACCATCTCTAGAAGTCCTTAAACTTGATTGGTGTCGAAAACTTAAACACTTCCCACATATAGAGAATGAGATGAATACACCATTGAAGATTCATATGATGGATACCTCTATTAAGAAGCTGCCAAATTCAGTTGGTAATCTTCTTGGACTCATTTCAATAAAAATGAGATACAGCAAGAATCTCGAACATCTACCAAGTTGTTTATTCAAGTTACCAAATGTTATTGCTTTTGACTTTGGATATTGTCCCAAACTTGGTGAATCTTTCAGAAGACTTCTACCTCATAGCCCTTCAGAAGACAATGAACGTTCAGCATTAAAAGTAATGCATCTTGAAGAAAGTGGTTTGTTAGATGAAGATATTGAGGCAATTCTCACATGTTTTCCAAAATTAGAAGAATTGAATGTTTCATATAATTACAACTTGGTCTCTCTCCCAATGTGCATTAAAGAATCTAATCACTTGAAGAATCTTAATGTCTCTGGTTGTAGGAGTCTTACACACATTTCAGAGTTGCCATGCACTATTCAAAAAATAGAAGCAAGAGAATGCTTCAACATTTCTTCGAAGACATCACACATGTTATGGGATCAGCTGAAAAAAGAGAGGCATGGATTAAAATTTGTGATTCCCGGACGCTACAAGGTACCAAAATGGTTCGATTATAGATGCAATGAAGGAATTCCATGTTTATGGGTTCGTGGGAAGTTTCCCATTAATGTTGATTTATCATTGGTGTTCCAAGCTGTGGATGGGAAGCAAAGTAAAGATTTGTATCTTCATCTTCATTTGGTTATCAACGGTCAATCTGTCCCTCGCAATTCTCACAAAGAGTATTATGACTTCCAAATTGATGTCAACCATGTTATAGTTTGTGATCTACAACTCTTATACAATGACGAGGAGTGGTTAAGCATTGATGCATTACTTCTAAAGCATGAATGGAATCAAGTGCAAATTTCATATGAAGCCTCGGACGGATTACCACTAAGTGAATGGGGAGTTTTTGTGTACAAACAAGGAAGAACTGTTAACTTGGAAGAACATGTTCAATTCATGTGTCCTGACCCAACAAGGTACTCAAACATAGCTAACACAGCAGTCCCTCCACACTACAAGAAATATCGTTTTTGA 4899 0.386 MANYEEQSHDSEKVKAWTAALSQVPNKKGHHYHIHKGNEIDHVKEIAEKVHAKIAPKPLLVGEKPVGLDQQIEEDMGREIIRQEEPNNPAKRSRLWLQEEVINVLLANDTGSDAIQGIVLYPPERITDPKHLPNYLRLLDWKFYPSKTFPPKFYPKDVIILKLPNGRLKLEEPFKQFSCLTVMNFSNNKYITTMPDVSEVENLRELRLDYCLNLTMVHESIGSLKNLVHFSASECKKLEIFLRSMFLPSLEVLNLDWCEKLEHFPEIENKMIKPLKIHMIGTSVKKLPNSVGNLTGLVSMDMQYSENLEYLPSSLFKLPNVVAFDFGGCSKLGESFKIFLPHSPSTLKKLHFEESGLSDEDVQAILTCFPKLEELIVYKNNLVSLPACIKESTHLANLDVSDCKKLKEIPECTNLRIMNVHGCMSLTHISELPCTIKKVDARKCFNFSSETSNMLWDQVKKEGHVFEIVMPGVKVPKWFNYIRKDEILCFWVRGKFPNVSLALVFQYADGKERINQDLVQLHLVINGQLVPHKDYNNFIIEPHHVLVCDLRLLYNDEEWLSIDALLQKHEWNQVQISYEFEYSHVTLSEWGVFVYKQGTDNLEAVNLNEQSDDLWEMLEAAKGEEQENNECNLNETVKNDEELMEIGNNNSSEQSERKLPATTTVPSVMEFIAQPNSECHKESVTGSYVMFETEASGKMKIKGSDEETTTVEDPNLFKEEECSQTRGDQGTILDPEPPSEPPYDDHRVVSIQQSETIDDEIGLSMTKSPWVQPTGEQALLKEEVRLQKIQVMRLLVTIAPPAKSPYSVKPSTVLPQRGPPPEPPDLATMGWILAKSPRMEVGSFRISTELFGVDQQAMNGEHNCVAFEGKAHSGLCLKFKSYFSWCDSLANESVVSLIYWLIQESSTCWKYTLMPTVTVAIMMPNPEALDYVFRKQVNFFNKDSGMQLRGQVGNNVSFYVLPISAVYSGWQTLKFWILKIEERKLNSLSIKAMKFILLVINGKYRDKEIASSLHEIDHVKEIAGKVGANIAPKPLHVGENPVGLDQRIEEVKSLLDLKPKDNTVCFLGIIGIGGIGKTELAKALYNEIVHQFVEASFLANVREKLKKINGLKDLEKQLEKHMLGRKNVLLVLDDVDEIPGNLNMGREIVRQEAANNPAKFNPMKVIILSLLDSQLITMEEPFKQFSCLTILDFSHNQFIATMPDVSKVENLRELRLDYCSNLTTVHESIGFLKHLVHLSVSECHQLENFLQRMFLPSLEVLKLDWCRKLKHFPHIENEMNTPLKIHMMDTSIKKLPNSVGNLLGLISIKMRYSKNLEHLPSCLFKLPNVIAFDFGYCPKLGESFRRLLPHSPSEDNERSALKVMHLEESGLLDEDIEAILTCFPKLEELNVSYNYNLVSLPMCIKESNHLKNLNVSGCRSLTHISELPCTIQKIEARECFNISSKTSHMLWDQLKKERHGLKFVIPGRYKVPKWFDYRCNEGIPCLWVRGKFPINVDLSLVFQAVDGKQSKDLYLHLHLVINGQSVPRNSHKEYYDFQIDVNHVIVCDLQLLYNDEEWLSIDALLLKHEWNQVQISYEASDGLPLSEWGVFVYKQGRTVNLEEHVQFMCPDPTRYSNIANTAVPPHYKKYRF 1632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04680 1632 SUPERFAMILY L domain-like 1160 1432 - -
Trre10g04680 1632 Gene3D - 1028 1148 IPR027417 -
Trre10g04680 1632 Gene3D Ribonuclease Inhibitor 1260 1459 IPR032675 -
Trre10g04680 1632 MobiDBLite consensus disorder prediction 720 743 - -
Trre10g04680 1632 Gene3D Ribonuclease Inhibitor 1149 1259 IPR032675 -
Trre10g04680 1632 Gene3D Ribonuclease Inhibitor 275 463 IPR032675 -
Trre10g04680 1632 Gene3D Ribonuclease Inhibitor 128 274 IPR032675 -
Trre10g04680 1632 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 969 1138 IPR044974 GO:0006952
Trre10g04680 1632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1035 1170 IPR027417 -
Trre10g04680 1632 SMART LRR_bac_2 369 388 - -
Trre10g04680 1632 SMART LRR_bac_2 1407 1427 - -
Trre10g04680 1632 SMART LRR_bac_2 1383 1403 - -
Trre10g04680 1632 SUPERFAMILY L domain-like 120 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04680 Trre-Chr10 55496662 55510418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04680 77 376 WRKY Transcription Factor Family AT4G12020 31.778 8.55e-33 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04680 - - tpra:123882301 644.81