Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04678 ATGTTATTAAAAAATAATGTGTTGTATTTTTATAGGGAAGAAATCGATCATATTAAAAAGATTGCCAAAAAGGTCCATGCTAATATAGCTCCTAAACCTTTTCTTGTTGGTGAGAGTCCAATTGGACTTGATCAACACGTAAAAGAAGTGAAGTCACTTGTACAATCCGGTACTGTATGCATGTTGGGAATAATTGGACTTGGCGGAATAGGGAAAACTGAACTTGCCAAAGCATTGTATAACAATATTGTGCACCAATTTGAAGCTGCAAGTTTTCTTGCCAATGTTAGAGAGAAATCGAACAAAATCAATGGCCTAGAAGATCTACAGTATACCCTTTTATCAGAGATGTTTGAGCAGCCAAAAACTAAGTTCGGAAGTACAAATAAAGGAATCGACGAAATAAAAAAAAAGCTTGGAAGGAAAAAGGTTCTTTTGGTACTTGACGATGTTGATGAGATGAAACAATTAGAAAACTTGGCAGGAGGAAATGATTGGTTTGGTCCAGGTAGTAGGATTATTATAACTACAAGGGACAAAGGTTTGCTCATGGGTAGTTATCCAATAGAAGTTAAGACTTATGAAATGGCTGAACTTAATGATCAACTTTCTCTTGAGTTGTTTTGTCGAATTGCCTTTGGAAAAAGTCATCCCAAAATAGAATATGAAGCTATGTCATCTCGCGCGGTTGGTTACGCCAAAGGTCTTCCGTTGGCTTTAAAAGTTATAGGCTCCAATTTGCGTACTAGAAAAAGTTTAAAAGCTTGGGAGGATGCATTGAAAGATTATGAGAGGATTCCCCGTAAAGAGATTCAAGATGTGCTTAGAGTAAGCTATGATGCATTGGAGCCTTTTGCACAAAGTGTTTTCCTAGATATAGCTTGCTTCTTCAAAGGGAAAAGGGTGGAATATGTTAAAGAAATACTTGAAGAATTCAGTGCAGCATCAAATATTGAAGAGCTTGAGAATAAATCTCTCTTGAATGTTGATAATGGATATTTGAATATGCATGACTTAATAGAGGATATGGGTAGAGAGATTGTTAGGCAAGAGGCACCGAATAATCCCGCAAAACGTAGTAGATTATGGTTTCATCAAGATGTCATTGATGTATTATCGGCCAACAATTCAGGGAGTGATGCAATTCAAGGGATAATGTTTGAACCTCCTGAATATACAACAGTAGAATGTTGGAATGATTCTGCTTTTGAGAAGATGAACCGTCTCAGAATTCTCATTGTTAAAAATACAAGGTTTTTATTAGAGCCTAAACATCTTCCAAATCATTTAAGACTACTTAACTGGATGAGATACCCTTCAAAGACTTTTCCAGCAAATTTTTATCCGAAGAACGTCATCATCTTAAATTTGCCTTGTAGTCGACTTACAATGGAAGAGCCACTTAAGCAGTTTTCATATCTGACTGTCCTGAATTTCTCAAATAATGAATCTATCACAACAATGCCGGATGTGTCTAAAGTTGAAAATTTAAGAGAATTGCGACTTGATCATTGTAAGAACTTAACTACAGTTCATGAATCCATTGGATTTCTCAAACAACTTGTCCACTTAAGCGCTTCAAGATGCAAAAATCTTGAAAACTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTGATTCGTGTTTTAAAATTGAACATTTTCCAGATATAGTGGACAAGATGAATAAACCATTGATGATTCGTATGTCAGACACCTCTATGAAGACACTGCCAAACTCATTTGGTAATCTTATTGGACTTGTTTCAATAGGCATGAAAAATTGTACCCAAAAACTCGAATATCTACCAAGTTGTTTTCTCAGGTTACCAAATGTTGATGAGTGTCACTTTGAAAATTGTCCTAAACTTGGTGGATCTTTCAGAAGAATTCTACCTGATAACCCTTCAGAAGCCAATGAACGTTCAAAATTAAAAGAGTTTCGGTGTTACAATTGTGGTTTGTTAGATGAAGATATTCAGACAATTCTTTTATATAATCCAAACATAGAAATATTGGATGTACCAGGCAACAATTTTGTCAATCTCCAAACGGGCATTAAAGAATCCAATCACTTGACATATCTTGATCTCAATGATTGCGTAGAGCTTCAAAATATTCCCAAATGCACCAACTTGAGACATCTTCATGTCAATGGTTGTACGAGTCTTGCACACATTTCAGAGTTGCCATGCACAATTCAAACAATAAATGCAAGCTATTGCTTCAACTTTTCTTTGGAGACAACAGACATGCTATGGGATCAGGTAAAAAACGAGAGGTCTGAATTAGAACATATTTTGATGCCTACAGTCGAAGTTCCAAAATGGTTTGATTATAGATGCAAAGGAGAATTACCGGTTTTTTGGGTTCGTGGGAAGTTTCCCAGAGTTGTTTTAGCATTGGTGTTCGAAGATGCAGTGGAGCAAACATATGCTGTTAATTTGCATGTTGAATTAATCCCATATATCAACGGCCGACGTGTCCCTTCGTCAAGCGTTTGCAAGTTCAAGATTGCACGGAATCATGTTATAGTTTGTGATTTACATATCTTATTCAATAACGCAAGCCTTGATGCATTACTTAAGCATGAATGGAATGAAGTGCAAATTGAATGTGATGTCAATGAAAGGACATATGAATTGGATAAAACCACAGACTATTACGTAAAACTAAGTGAATGGGGAGTTTATGTGTACAAACAAGGAACTGTTAACTGGAAAGAACATGTTCAATTCATGTGTCCTACGAAGGATCCAAATATGACGATAGAGGATTCCAATGATGCTTCTGTTAATGAAAATCATGATCATAAAATAATTGGCATAGAGGATATAATTCCTAGTCCTACTGCTCCAGAAGTACTTGATGAAACTGATCAGGACACTCCAATGTTTGAGGAGGTCGAGGAACATGTTACTCATGAGGATTCCAATGATGCTGCTGTTAATGAAAATGAAAATCATGATGACAAAATAATTGGAATAGAGGATCCAAAAGTTGGTGAAATTCAGGACACTCCTTACCCCTCTGGTTTCTTCTAG 3054 0.3615 MLLKNNVLYFYREEIDHIKKIAKKVHANIAPKPFLVGESPIGLDQHVKEVKSLVQSGTVCMLGIIGLGGIGKTELAKALYNNIVHQFEAASFLANVREKSNKINGLEDLQYTLLSEMFEQPKTKFGSTNKGIDEIKKKLGRKKVLLVLDDVDEMKQLENLAGGNDWFGPGSRIIITTRDKGLLMGSYPIEVKTYEMAELNDQLSLELFCRIAFGKSHPKIEYEAMSSRAVGYAKGLPLALKVIGSNLRTRKSLKAWEDALKDYERIPRKEIQDVLRVSYDALEPFAQSVFLDIACFFKGKRVEYVKEILEEFSAASNIEELENKSLLNVDNGYLNMHDLIEDMGREIVRQEAPNNPAKRSRLWFHQDVIDVLSANNSGSDAIQGIMFEPPEYTTVECWNDSAFEKMNRLRILIVKNTRFLLEPKHLPNHLRLLNWMRYPSKTFPANFYPKNVIILNLPCSRLTMEEPLKQFSYLTVLNFSNNESITTMPDVSKVENLRELRLDHCKNLTTVHESIGFLKQLVHLSASRCKNLENFLQRMFLPSLEVLDLDSCFKIEHFPDIVDKMNKPLMIRMSDTSMKTLPNSFGNLIGLVSIGMKNCTQKLEYLPSCFLRLPNVDECHFENCPKLGGSFRRILPDNPSEANERSKLKEFRCYNCGLLDEDIQTILLYNPNIEILDVPGNNFVNLQTGIKESNHLTYLDLNDCVELQNIPKCTNLRHLHVNGCTSLAHISELPCTIQTINASYCFNFSLETTDMLWDQVKNERSELEHILMPTVEVPKWFDYRCKGELPVFWVRGKFPRVVLALVFEDAVEQTYAVNLHVELIPYINGRRVPSSSVCKFKIARNHVIVCDLHILFNNASLDALLKHEWNEVQIECDVNERTYELDKTTDYYVKLSEWGVYVYKQGTVNWKEHVQFMCPTKDPNMTIEDSNDASVNENHDHKIIGIEDIIPSPTAPEVLDETDQDTPMFEEVEEHVTHEDSNDAAVNENENHDDKIIGIEDPKVGEIQDTPYPSGFF 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04678 1017 Gene3D - 198 283 IPR042197 -
Trre10g04678 1017 SUPERFAMILY L domain-like 336 735 - -
Trre10g04678 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 293 IPR027417 -
Trre10g04678 1017 Gene3D Ribonuclease Inhibitor 572 762 IPR032675 -
Trre10g04678 1017 Gene3D Ribonuclease Inhibitor 391 571 IPR032675 -
Trre10g04678 1017 PRINTS Disease resistance protein signature 61 76 - -
Trre10g04678 1017 PRINTS Disease resistance protein signature 233 247 - -
Trre10g04678 1017 PRINTS Disease resistance protein signature 539 555 - -
Trre10g04678 1017 PRINTS Disease resistance protein signature 138 152 - -
Trre10g04678 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 713 IPR044974 GO:0006952
Trre10g04678 1017 Pfam NB-ARC domain 45 282 IPR002182 GO:0043531
Trre10g04678 1017 Gene3D - 22 186 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04678 Trre-Chr10 55454275 55463843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04678 41 627 WRKY Transcription Factor Family AT4G12020 30.569 5.74e-63 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04678 - - tpra:123882297 1415.59