Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04677 ATGGCAAATTATGAAGAACGGTCACATGGTTTCACCTATGATGTTTTCCTCAGTTTTAGAGGGGAAGACGTACGCTATGGCAAAGCCATGGTTGCTCATCAGAAGAGGTTTGGAAAAGAATCTGAGAAGATAAAAGCATGGACAGCAGCATTGTCTAAAGTGCCAAACTTGAAAGGTCACCACCACCATATCCACAATGGGCACGAAATCGATCATGTTAAAGAGATTGCCGGAAAGGATATGGGTAGAGAGATTGTTGAGCAAGAGGCACCAAATAATCCTGCAAAACGTAGTAGATTATGGTTTCATCAAGATGTCATTGATGTATTATCCTCCAACGATTCTGGGAGTGATGCAATTCAAGGGATAATTCAACTTTCAATAAAAAAACCATTTGAGCAATTTTTATATCTGACTGTCATGAATTTCTCAAATAATCAATCTATGAAAACAATGCCTGATGTCTCAAAAGTTGAATATTTGAGAGAGTTGCGACTTGATCGTTGTTTTAACTTAACTACGGTTCATGAATCCATTGGATTTCTCAAACATCTTATCCACTTAAGCGCTTCGAGTTGCACCAAACTTGTAAACTTTCCGCATAGAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTAATAGGTGTTTTAAACTTGAACACTTCCCGGATATAGTGAACAAGATGAATAAACCATTGAAGATTCACATGAGCCAAACCTCTATTAAGAAGCTGCCAAATTCTGTTGGTAATCTTATTGGACTTGTTTCAATAGATATGACGACTAGCTTCAATCTCAAATATCTACCAAGTAGCTTATTCAGGTTACCAAATGTTGTTGCTTTGAAATTTGAACTATGCAACAGTGTTAAATTTGGTGGTGAATCTTTCAGAAGATTTCTACTTGATAGCCCTTCAGAAGCCAATGAACATTCAACATTAAAAACAGTGAAAAAAGAGAGACATGGATTAGTAATTGTGATGCCTAGTAAAATCAAGGTACCAAAATGGTTCGATTATAGTTGTAAAGGAGGAATTCCGTGTTTATGGGTTCGTAGGAAGTTTCCCATTAATATTGCATTAGCATTGGTGTTCCGAGAGACGCGATATTGTTTGGATAATCCTACTCAACTTAATTTGGTTATCAACGGTCAATCTGTCCGTCGCATAAAAAATAACATATTCTATATTCAATCGGATCATGTTTTAGTTTGTGATCTACGACTCATATACAATGACGAGGAGTGGTTAAGCATTGATGCATTATTTCTAAAGCATGAATGGAATCAAGTGCAAATTTCATATGAATCCAAGTACCATACCGAAACAGTCAGTCAATGGGGAGTTTTTGTGTACAAACAAGGAACTGATAACTTGGAAGAACATGTTCAATTCACGTGTCCCAACAAGGTAGTCAAACATTGCGTCAAAAAAAGAAAAAAGGTACTCAAACATATAGAGGAGTTAGCTTTCGATGAAATACCTGAACCTGGGGACGAAATTAGAGACAAACCTCACGATAAAGTGACAATGTTTCAAACTATGAAATTGCTAGTTTTTTCGTTGAAATTGTTTTTGATAAGAGTTGGCATTATCTATAGCTAG 1605 0.3632 MANYEERSHGFTYDVFLSFRGEDVRYGKAMVAHQKRFGKESEKIKAWTAALSKVPNLKGHHHHIHNGHEIDHVKEIAGKDMGREIVEQEAPNNPAKRSRLWFHQDVIDVLSSNDSGSDAIQGIIQLSIKKPFEQFLYLTVMNFSNNQSMKTMPDVSKVEYLRELRLDRCFNLTTVHESIGFLKHLIHLSASSCTKLVNFPHRMFLPSLEVLDLNRCFKLEHFPDIVNKMNKPLKIHMSQTSIKKLPNSVGNLIGLVSIDMTTSFNLKYLPSSLFRLPNVVALKFELCNSVKFGGESFRRFLLDSPSEANEHSTLKTVKKERHGLVIVMPSKIKVPKWFDYSCKGGIPCLWVRRKFPINIALALVFRETRYCLDNPTQLNLVINGQSVRRIKNNIFYIQSDHVLVCDLRLIYNDEEWLSIDALFLKHEWNQVQISYESKYHTETVSQWGVFVYKQGTDNLEEHVQFTCPNKVVKHCVKKRKKVLKHIEELAFDEIPEPGDEIRDKPHDKVTMFQTMKLLVFSLKLFLIRVGIIYS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04677 534 SUPERFAMILY L domain-like 128 296 - -
Trre10g04677 534 Gene3D Ribonuclease Inhibitor 236 318 IPR032675 -
Trre10g04677 534 Gene3D Ribonuclease Inhibitor 110 235 IPR032675 -
Trre10g04677 534 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 129 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04677 Trre-Chr10 55433516 55438009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04677 138 300 WRKY Transcription Factor Family AT4G12020 33.742 5.85e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04677 - - tpra:123882297 256.914