Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04675 ATGGCAAGTTATGAAGAACAGTCACATGGTTTCACCCATGATGTTTTCCTCAGTTTTAGAGGGGAAGACACGCGGTACAATATTGTTGGATATCTTCGTGAAGGTCACCGTATCGACACTGGGCACGAAATCGATCATGTTAAAGAGATTGCCGAAAAGGTCCATGCTAATATAGCTCCTAAACCTTTAGTTGTGGGTGAGAATCCAGTTGGACTTGATCAACACGTAGAAGAGGTGAAGTCACTTCTAGCCTTGGAGCCAAATGACGATACTGTATGCATGTTGGGCATAACTGGACTTGGCGGAATAGGGAAAACCGAACTTGCCAAAGCATTAGAGATTGTTAGGCAAGAGGCACCAAATAATCCTGCAAAACGTAGTAGATTATGGCTTCAACAAGATGTCATTGATGTATTATCGGCCAATGATTCTAGGAGTGATGCAATTCAAGGGATAATGCTTGATCCTCCTGAAGATACAATAGAAGTAAATTGGGATGGTTCTGCTTTTGAGAAGATGAACCGTCTCAGGATTCTCATTGTTCGAAATACAACTTTTTCATCAGCCCCTAAACATCTTCCAAATCATTTAAGGCTACTTGACTGGAAGGAATACCCTTCAAAGACCTTCCCACCAAAATTTTATCCGAAGGAAATCATCATCTTAAGTTTGTTGGATAGTCAACTTACAATGGAAGAGCCATTTAAGCAATTTATATATCTGACTGTCATGAATTTCTCATTTAACCAATCTATCACAACAATGCCGGATGTGTCCAAAGTTGAAAAATTGAGAGAATTGCGACTTGATGATTGTGAGAACTTAACTACAGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGTTTCGGGATGCACCAAACTTGAACATTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTAAACTTGATTGGTGTGAAAAACTTGAACACTTCCCAGATATAGAGAAAGAGATTAGTACACCATTGAAGATTCATATGATGGGTACCTCTATTAAGAAGCTGCCAAATTCAGTTGGTAATCTTATTGGACTTGTTTCAATGGACATGCAATATAGCGAGAATCTTGAATATCTACCAAGTAGCTTATTCAAGTTACCAAATGTTGTTTCTTTTGACTTTGGAAGTTGTTCTAAACTTGGTGAATCTTTCAAAACATTTCTACCTCAAAGCCCTTCAGAAGACAGTGAACGTTCAACATTAAAAATAATGCATTTTGAAGAAAGTGGTTTGTTAGATGAAGATATTGAGGCAATTCTCACATGCTTTCCAAAATTAGAAGAATTGATTGTATATAAAAATAATTTGGTCTCTCTGCCAGCGTGCATTAAAAAGTCTGCTCACTTGACAAATCTTGATGTTAGTGATTGCAAAAAGCTTAAAGAAATTCATGTATGCACCAACTTGAGAATTCTTAATGTCCATGGTTGTATGAGTCTTACACACATTTCAGATTTGCCATGCACTTTTCGAAAAATAGATGCAAGAAAATGCTTCAACTTTTCTTCAGAGACATCTAACATGCTATGGGATCAGGTAAAAAAAGAGCGGCATGTATTAGAAATTATGATGCCTGGAGTCGAGGTTCCAAAATGGTTTAATTATATATGCAAAGATGAAATTCCGTGTTTTTGGGTTCGTGGGAAATTTCCCAATGTTTCTTTGGCATTGGTGTTCCAATATGCGGATGGGAAGGAAAGAATAAATCAGGATCTTGTTCAACTTCATTTGGTTATCAACGGTCAATTAGTCCCTCACAAAGACTATAACAACTTCATAATTGAACCGCATCATGTTTTAGTTTGTGATCTACGACTCTTATACAATGACGAGGAGTGGTTAAGCATTGAGGCATTACTTCTAAAGCATGAATGGAATCAAGTGCAAATTTCATATGAATTCGAGTACAGTCACGTGACACTAAGTGAATGGGGAGTTTTTGTGTACAAACAAGGAACTGATAACTTGAAAGCTGTTAACTTGAATGAACAGTCGGATGGTTTCACCTATGATGTTTTCCTCAGTTTTAGAGGGGAAGACATGCCCTATGAAAAAGCCATGGTTGCTCATCAGAATAAGTTTGGAAAAGACTCGGAAAAAATAAAAGCATGGACAGAAGCATTGTCTGAAGTGGCAGACTTTAAAGGTCACCATATCGACACGGGGCACAAAATCGATCACGTTAAAGAGATTGCCGAAAAGGTCCATGCTAATATAGCTCCTAAACCTTTACTTGTGGGTCAGAATCCAGTTGGACTTGATCAACGCATAGAAGAGGATATGGGTAGAGAGATTGTTTGGCAAGAGGCACCATATAATCCTGCAAAATTTAATCCGATGAAAGTCATCATCTTAAGTTTGCTTGAAAGTCAACTAATTACAATGGAAGAGCCATTTAAGCAATTTATAAATCTGACTGTCATCAAGTTTTCATCTAACCAATTTATCACAACATTTCCGGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATTATTGTCAGAGTTTAACTACAGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGTTTCCGGATGCCATAAACTTGAAAATTTTCTGCAGAGAATGTTTTTACCATCTCTAGAAGTCCTTAAACTTGATTGGTGTCGAAAACTTGAACACTTCCCAGATATAGAGAATGAGATGAATACACCATTGAAGATTCATATGATGGGTACCTCTATTAAGAAGCTGCCAAATTCAGTTGGTAATCTTATTGGACTATTTTCAATGGACATGAAATACAGCGAGAATCTCGAATATCTACCAAGTGGTTTATTCAAGTTACCGAATGTTGTTGCTTTTGACTTTGGAGGTTGTTCTAAACTTGGTGAATCTTTCAGAAGATTTCTACCTGATAATCCTTCAGAAGAAAATGAACGTTCAACATTAAAAGTAATGAATCTTGAAAATAGTGGTTTGTCAAATGAAGATATGCAGCCAATTCTCGTATGTTTTACAAAACTAGAAGAATTGAATGTGTCATATAATTACAACTTGGTCTCTCTTCCGGCGTGCATTAAAGAATCTAATCACTTGAAGAATCTTAATGTCTCTGGTTGTAGGAGTCTTAAACACATTTCAGAGTTGCCATGCACTATTCAAAAAATAGAAGCAAGAGAATGCTTCAACATTTCTTTGAAGACATCAGACATGTTATGGGATCAGCTGAAAAAAGAGAGGCATGGATTAGAATTTGTGATGCCCGGATGCCTCAAGGTACCAAAATGGTTCGATTATAGATGCAATGAAGGAATTCCATGTTTATGGGTTCGTGGGAAGTTTCCCATTAATGTTGCTTTATCATTGGTGTTCCAAGCTGTGGATGGGAAGCAAAGTAAATATTTGTATCTTCAACTTCATTTGGTTATCAACGGTCAATCTGTCCCTCGCAATTCTCACAAAGAGTATTATGACTTCCAAATTGATGTCGACCATGTTATAGTTTGTGATCTACGACTCTTATACAATGACGAGGAGTGGTTAAGCATTGATGCATTACTTCTAAAGCATGAATGGAATCAAGTGCAAATTTCATATAAAGCCTCGTACGGATTAACACTAAAAATACTTGAAGAGGATTTCAAACATGAGGATTCCAATGATACTGCTGTTAATGAAAATCATGATGATAAAATAATTGGCATAGAGAATATTCCTAGTCCTACTGCCCCAGAAGTTGATGAAATTGATCAGGACACTCCTGTGTTTGAGGAGAACAAGGAACATGTTACTCATGAGGATTCCAATGATGCTGCTGTTAATGAAAATGAAAATCGTGATGACAAAATAATTGGAATAGAGGATCCAGAAGTTGGTGAAATTCAGGACACTCCTTACCCCTCTGGTTTCTTCTGGAGGCTTTTGTACACTTGTTTTTGTAAGTTTTTCTCTTAG 3978 0.37 MASYEEQSHGFTHDVFLSFRGEDTRYNIVGYLREGHRIDTGHEIDHVKEIAEKVHANIAPKPLVVGENPVGLDQHVEEVKSLLALEPNDDTVCMLGITGLGGIGKTELAKALEIVRQEAPNNPAKRSRLWLQQDVIDVLSANDSRSDAIQGIMLDPPEDTIEVNWDGSAFEKMNRLRILIVRNTTFSSAPKHLPNHLRLLDWKEYPSKTFPPKFYPKEIIILSLLDSQLTMEEPFKQFIYLTVMNFSFNQSITTMPDVSKVEKLRELRLDDCENLTTVHESIGFLKHLVHLSVSGCTKLEHFLQRMFLPSLEVLKLDWCEKLEHFPDIEKEISTPLKIHMMGTSIKKLPNSVGNLIGLVSMDMQYSENLEYLPSSLFKLPNVVSFDFGSCSKLGESFKTFLPQSPSEDSERSTLKIMHFEESGLLDEDIEAILTCFPKLEELIVYKNNLVSLPACIKKSAHLTNLDVSDCKKLKEIHVCTNLRILNVHGCMSLTHISDLPCTFRKIDARKCFNFSSETSNMLWDQVKKERHVLEIMMPGVEVPKWFNYICKDEIPCFWVRGKFPNVSLALVFQYADGKERINQDLVQLHLVINGQLVPHKDYNNFIIEPHHVLVCDLRLLYNDEEWLSIEALLLKHEWNQVQISYEFEYSHVTLSEWGVFVYKQGTDNLKAVNLNEQSDGFTYDVFLSFRGEDMPYEKAMVAHQNKFGKDSEKIKAWTEALSEVADFKGHHIDTGHKIDHVKEIAEKVHANIAPKPLLVGQNPVGLDQRIEEDMGREIVWQEAPYNPAKFNPMKVIILSLLESQLITMEEPFKQFINLTVIKFSSNQFITTFPDVSKVENLRELRLDYCQSLTTVHESIGFLKHLVHLSVSGCHKLENFLQRMFLPSLEVLKLDWCRKLEHFPDIENEMNTPLKIHMMGTSIKKLPNSVGNLIGLFSMDMKYSENLEYLPSGLFKLPNVVAFDFGGCSKLGESFRRFLPDNPSEENERSTLKVMNLENSGLSNEDMQPILVCFTKLEELNVSYNYNLVSLPACIKESNHLKNLNVSGCRSLKHISELPCTIQKIEARECFNISLKTSDMLWDQLKKERHGLEFVMPGCLKVPKWFDYRCNEGIPCLWVRGKFPINVALSLVFQAVDGKQSKYLYLQLHLVINGQSVPRNSHKEYYDFQIDVDHVIVCDLRLLYNDEEWLSIDALLLKHEWNQVQISYKASYGLTLKILEEDFKHEDSNDTAVNENHDDKIIGIENIPSPTAPEVDEIDQDTPVFEENKEHVTHEDSNDAAVNENENRDDKIIGIEDPEVGEIQDTPYPSGFFWRLLYTCFCKFFS 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04675 1325 SUPERFAMILY L domain-like 154 512 - -
Trre10g04675 1325 SUPERFAMILY L domain-like 790 1056 - -
Trre10g04675 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 112 IPR027417 -
Trre10g04675 1325 MobiDBLite consensus disorder prediction 1270 1289 - -
Trre10g04675 1325 Gene3D - 51 148 IPR027417 -
Trre10g04675 1325 PRINTS Disease resistance protein signature 883 899 - -
Trre10g04675 1325 PRINTS Disease resistance protein signature 94 109 - -
Trre10g04675 1325 PRINTS Disease resistance protein signature 331 345 - -
Trre10g04675 1325 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 780 905 IPR044974 GO:0006952
Trre10g04675 1325 Gene3D Ribonuclease Inhibitor 339 533 IPR032675 -
Trre10g04675 1325 Gene3D Ribonuclease Inhibitor 162 338 IPR032675 -
Trre10g04675 1325 Gene3D Ribonuclease Inhibitor 790 907 IPR032675 -
Trre10g04675 1325 Gene3D Ribonuclease Inhibitor 908 1074 IPR032675 -
Trre10g04675 1325 Gene3D - 694 758 IPR035897 -
Trre10g04675 1325 SMART LRR_bac_2 436 455 - -
Trre10g04675 1325 SMART LRR_bac_2 1015 1033 - -
Trre10g04675 1325 SMART LRR_bac_2 1037 1057 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04675 Trre-Chr10 55420471 55431150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04675 109 474 WRKY Transcription Factor Family AT4G12020 31.510 1.80e-37 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04675 - - tpra:123882301 732.635