Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04671 ATGCCTGGAATCACGGTTCCAAAATGGTTCAATTATATATGCAAAGATGGAATTCCATGTTTATGGGTTCGTGGGAAGTTTCGCAATGTTGCTTTAGCGTTGGTGTTCCAATATGCGGATGGGAAGGAAAGAATAGATCCGGATCTTGTCCAACTTCATTTGGTTATCAACGGTCAATCTGTCCCGGAAAAAGGCTACTACAACTTCATAATTGAACCGCATCATGTTTTAGTTTGTGATCTCCGACTCTTATTCAATGACGAGGAGTGGCTAAACCTTGATGGATTACTGCTTAACCATGAATGGAATCAAGTGCAAATTTCATATGAAGCCAAGAACAACGTGGTGACACTAAGTGAATGGGGACTTTTTGTGTCCGAACAAGAAACTTATAACTTTGAAGCTGTTAACTTGAATGAACAATCGGATGGTTTCACCTATGATGTTTTCCTCAGTTTTAGAGAGGAAGACATGCCGTTAGATTTTATTGGACATCTTCATGTACCAAGTGGACTTGATCAACACATAGAAGAGGTGAAGTCACTTCTAGACTTGAAGCCAAATGACAATACCGTATGCATGTTAGGCATAACTGGACTTGGCGGAATAGGGAAAACTGAACTTGCCAAAGCATTTCAACTAATTACAATGGAAGAGCCATTTAAGCAATTTTCATATTTGACTATCATGAATTTCTCAAATAATCAAGTTATCACAACAATGCCTGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCAACTTGATGATTGTGAGAACTTAACTACTGTTCATGAATCCATTGGATTTTTCAAACATCTTGTCCACTTAAGCGCTTCGGGATGCACCAAACTTGAAAATTTTTTGCAAAAAATGTTTTTACCATCTCTAGAAGTCCTTAAACTTGATTGGTGTAAAAAACTTGAACACTTCCCAGTTATAGAGAACGAGATGAATACACCATTGAAGATTCATTTGATGGGTACCTCTATTAAGAGGCTGCCAAATTCAGTTGGTAATCTTATTGGACTTGTTTCAATGAACATGCGATATAGCAAGAATCTCGAATATCTACCAAGTAGTTTACTCAAGTTGCCAAATGTTGTTGCTTTTGACTTTGGATTTTGTTCTAAACTTGGTGAATCTTTCAGAAGATTTCTACCTCATAGCCCTTCAAAAGACAATGAACCTTCAACATTAAAAACAATGTGTTTTGAAGAAAGTGGTTTGTCAGATGAAGATATGCAGGCAATTCTCATATATTTTCCAAAATTAGAAGAATTGATTGTATATAACAACAATTTGGTCTCTCTGCCAGCGTGCATTAAAGAATCTGCTCACTTGACAAATCTCAATGTTAGGAATTGCACAAAGCTTAAAGAAATTGCCGAATGCACCAACTTGAGAATTCTGAAACTTTGGAAATGTAAGAGTCTTACACACATTTCAGAGTTGCCATGCACTATTCAAAAAGTAGATGCAAGTGAATGCTTCAACATTTCTTCAGAGACATCAGACATGTTATGGGATCAGGTGAAAAAAGAGAGGCATGGATTAGAAATTGTGATGCCTAAAACCAAGGTTCCTAAGTGGTTCGATTATAGATGCAAAAATGGAATTCCGTGTTTATGGATTCGTGGGAAGTTTCCTATTAATGTTGCATTAGCATTGGTGTTTCAAGCTGTGAACTTGCATGATGGTTTTTATCATGATTTTGTTCGACTTCATTTGGTTATCAACGGTCAGTCTCAAAAAGGCAATTGCGTGTTCAATATTGTAGAGGATCATGTTTTAGTCTGTGATCTACGACTCTTATACAATGACGAGGAGTGGTTAAGCATTGATACATTACTTCTTAAGCATGAATGGAATCAAGTGCAAATTTCACATGCCTCGCACAGTAACGTGACACTAAGTGAATGGGGAGTTTTTGTATACAAACAAGGAAGAACTGTTAACTTGGAAGAACATGTCCAATTCACGTGTCCTGACCCAACAAGGTACTCAGACATAGCTAACATAATAGTCCCTCCAAAAAATCCTATGAATGAATGA 2055 0.3698 MPGITVPKWFNYICKDGIPCLWVRGKFRNVALALVFQYADGKERIDPDLVQLHLVINGQSVPEKGYYNFIIEPHHVLVCDLRLLFNDEEWLNLDGLLLNHEWNQVQISYEAKNNVVTLSEWGLFVSEQETYNFEAVNLNEQSDGFTYDVFLSFREEDMPLDFIGHLHVPSGLDQHIEEVKSLLDLKPNDNTVCMLGITGLGGIGKTELAKAFQLITMEEPFKQFSYLTIMNFSNNQVITTMPDVSKVENLRELQLDDCENLTTVHESIGFFKHLVHLSASGCTKLENFLQKMFLPSLEVLKLDWCKKLEHFPVIENEMNTPLKIHLMGTSIKRLPNSVGNLIGLVSMNMRYSKNLEYLPSSLLKLPNVVAFDFGFCSKLGESFRRFLPHSPSKDNEPSTLKTMCFEESGLSDEDMQAILIYFPKLEELIVYNNNLVSLPACIKESAHLTNLNVRNCTKLKEIAECTNLRILKLWKCKSLTHISELPCTIQKVDASECFNISSETSDMLWDQVKKERHGLEIVMPKTKVPKWFDYRCKNGIPCLWIRGKFPINVALALVFQAVNLHDGFYHDFVRLHLVINGQSQKGNCVFNIVEDHVLVCDLRLLYNDEEWLSIDTLLLKHEWNQVQISHASHSNVTLSEWGVFVYKQGRTVNLEEHVQFTCPDPTRYSDIANIIVPPKNPMNE 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04671 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 239 IPR027417 -
Trre10g04671 684 Gene3D Ribonuclease Inhibitor 321 517 IPR032675 -
Trre10g04671 684 Gene3D Ribonuclease Inhibitor 195 320 IPR032675 -
Trre10g04671 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 212 313 - -
Trre10g04671 684 SUPERFAMILY RNI-like 221 514 - -
Trre10g04671 684 PRINTS Disease resistance protein signature 463 479 - -
Trre10g04671 684 PRINTS Disease resistance protein signature 194 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04671 Trre-Chr10 55386828 55392184 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04671 227 460 WRKY Transcription Factor Family AT4G12020 30.213 1.15e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04671 - - tpra:123882301 553.518