Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04669 ATGGCAAATTATGAAGAACAGTCACATGATGTACGAAATCAAGGAAACAGCTATGGCACAGCCATAGATGATCATAAGAAAAAGTATGGAAAAGACTCAGAAAAAGTAAAAGCATGGACAGCAGCATTGTCTGACGTTGCAAACTTGAAAGGTCACCACTACCATATCCACAAGGGTAACGAAATCGATCATGTTAAAAAGATTGCCGAAAACGTCCATGCTAAGATAGCTCCTAAACCTTTACTTATTGCCAAAAATTCTGGAAGTTATGCAATTCAAGGGATAATGCTTGATCCTCCCCAACGTATAACAGAAGTAGATTGGAATGATACTGTTTTCGAGAAGATGGACCGTCTTAGAATTCTCATTGTTCAACATACAACCTTTTCATCAGAGCCTAAACATCTTCCAAATCATTTAAGGCTACTTGACTGGGATGTATACCCTTCAAAGACTTTTCCTCCCAAATTTTACCCGAGGAATACCATCATCTTAAATTTGCCTAATAGTCAACTTACAATGGAAGAGCCATTTAAGCAATTTTCATATCTGATTGTCATGAATTTCTCCAATAATCAATCTATCACAACAATGCCTGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATAATTGTCGAAACTTAACTACGGTTCATGAATCCATTGGATTTCTCAAACATCTTATCCACTTAAGCGCTTCGGGTTGCACTGAACTTGAAAACTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTGATTGGTGTAAAAAACTTGAACACTTCCCAGATATAGTGAACAAGATGAATAAACCATTGAAGATTCGTATGAGCCATACCTCTATTAAGAAGCTGCCAAATTCTATTGGTAATCTTATTGGACTTGTTTCAATAGACATGGAACATAGTGAGAAACTCGAATACCTACCAAGTAGCTTATTCGGATTACCAGATGTTGTTGCTTTTGACTTTGGAAGTTGTTCTAAACTTGGTGGATCTTTCAAAAGATTTCTATCCGATAGCCCTTCAGAAGGCAATGGACATTCAACATTAAAAAGAATTCATTTTGAAGAAAGTGGTTTGTCCGATGAAGATATGCAGTCTATTCTCATATGTTTTCCAAAATTAGAAGAATTGATTGTACCAGGTAACAATTTGGTCTCTCTGCCAGCGTGCATTAAAGAGTCTGCTCACTTGACAAATCTTGATGTTAGTGATTGCAAAAAGCTTAAAGAAATTCCCCAATGCACCAACTTGAGAATTCTGAATGTGAATGATTGTACGAGTCTTGCACATATTTCAGAGTTGCCACACACTATTCAAAAAATAGATGCAAGAAAATGCTTCAACTTTTCTCAAAAGACATCAAACATGCTATGGGATCAGGGTTTATCTGTGGAAGAGGATGCTTTGTTGGTAGAGGTTGATAGTACAGTGTTGAAGGAGCTACGGGAGAGTTTTGTCGGAAAGCTGGCTTTGAATATTGAAGTTTCGAGAATCCGGACTACTCTTTTCATGGAAGGTTTACCTCACATTTCAATAACAGAGATGGGAAGAAGTCTTGTGCTTATCCATAGTCCTTATGAGGGGGAGATGGAAAGATTGTGCAAAGCTAAGGCTGACGGGCTTACCTACTACTTCAAACAGAATTTGTTCAAAGTCATTGGGGGAAATTATGGTGAGTTTCCGGATTTCGACAACAACACAACATCAAGGGCAAAACTTGATGTCGCGAGAATCAAGATTGCAACAGACTTCAGAGGTGGTATTGATGAATTTCTCAAGATCAAGGCGTTGGGGGTTGTTTATAGGCTGCGAATAGTAGAAGAAAAGGAGGTGGTTCAAGAGATATTCCATGGAGAGAGATTTGAAGAACAAGAGCCGAGTTGGGCGGAGTCCGTTAAAATGCCTATAGGGGTGGTGGAGGAGGAAGGTGATGGAAAGGGCGGTAGTACGGATAAAGGAGAAGAAGAAGACGATGTTGACTTTCTCTTCGATCAACATCAGGAGCGTGGGGTTAGTAAACAGGTGGATGGTGATGGGTCCTTGGTTTTAGGAGGTAAGGGTCAAAATCCTATTCGTGTGTCAGAAGGATGTTTGGAAGATCAAAATGAAGTGGTGAAGGAAGGTGGAGGTGGGAGACAAAGAAAAAAGAAGAAGGGAGTCGAAGCTGTGAGGGCAGAGAAGGGGAAATGGGTTTTGCTATGTTCAAATACAGATGGGGATGGCAATTCAGAAGTGCCAAATTCGATGGAAGGGCTGATTTTGGAGGTGGTTCTGCCTGCTATTGAACATACTCCGAAATTTAGTCTTGTGATGTTGCTAGCAGACGGTGAGGATGTTGGAGGGCAACAAGTGGATGCAATTCATGCGGAGTCTAAAAAGCTTTAG 2409 0.3985 MANYEEQSHDVRNQGNSYGTAIDDHKKKYGKDSEKVKAWTAALSDVANLKGHHYHIHKGNEIDHVKKIAENVHAKIAPKPLLIAKNSGSYAIQGIMLDPPQRITEVDWNDTVFEKMDRLRILIVQHTTFSSEPKHLPNHLRLLDWDVYPSKTFPPKFYPRNTIILNLPNSQLTMEEPFKQFSYLIVMNFSNNQSITTMPDVSKVENLRELRLDNCRNLTTVHESIGFLKHLIHLSASGCTELENFLQRMFLPSLEVLDLDWCKKLEHFPDIVNKMNKPLKIRMSHTSIKKLPNSIGNLIGLVSIDMEHSEKLEYLPSSLFGLPDVVAFDFGSCSKLGGSFKRFLSDSPSEGNGHSTLKRIHFEESGLSDEDMQSILICFPKLEELIVPGNNLVSLPACIKESAHLTNLDVSDCKKLKEIPQCTNLRILNVNDCTSLAHISELPHTIQKIDARKCFNFSQKTSNMLWDQGLSVEEDALLVEVDSTVLKELRESFVGKLALNIEVSRIRTTLFMEGLPHISITEMGRSLVLIHSPYEGEMERLCKAKADGLTYYFKQNLFKVIGGNYGEFPDFDNNTTSRAKLDVARIKIATDFRGGIDEFLKIKALGVVYRLRIVEEKEVVQEIFHGERFEEQEPSWAESVKMPIGVVEEEGDGKGGSTDKGEEEDDVDFLFDQHQERGVSKQVDGDGSLVLGGKGQNPIRVSEGCLEDQNEVVKEGGGGRQRKKKKGVEAVRAEKGKWVLLCSNTDGDGNSEVPNSMEGLILEVVLPAIEHTPKFSLVMLLADGEDVGGQQVDAIHAESKKL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04669 802 Gene3D Ribonuclease Inhibitor 281 469 IPR032675 -
Trre10g04669 802 Gene3D Ribonuclease Inhibitor 101 280 IPR032675 -
Trre10g04669 802 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 116 276 - -
Trre10g04669 802 MobiDBLite consensus disorder prediction 1 29 - -
Trre10g04669 802 MobiDBLite consensus disorder prediction 1 20 - -
Trre10g04669 802 SUPERFAMILY L domain-like 113 446 - -
Trre10g04669 802 Gene3D - 3 82 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04669 Trre-Chr10 55377137 55383484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04669 86 336 WRKY Transcription Factor Family AT4G12020 33.582 1.64e-31 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04669 - - tpra:123882297 555.058