Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04661 ATGAGTATTGGAAAAGTTGAATTCAATGTGAATATGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTACTGAGACTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTGGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGCAATAACCGTGGTGTTGATTTTGTTGAAGCTTTTGCTGATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAAGTGTTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTTCTTGCTGTTCAGGCAACATGGATGAAATGTGGTGGATTAGTAGTGGCATGCACTTTTGACCATCGTATAGCGGATGCCTATTCTGCAAATATGTTCCTTGTATCTTGGGCTGAGATAGCCCGACCCAAGAATAACAAATTATTCATTCCAACAACACAACCTTGTTTTCGGAGATCTCTTTTGACCCCACGACGCCCACCTTCCATCCATCCTTCACTTTATGACATGTACGTCCCCCTCTCTGATCTACCTCCTCCACCTGCACCTGAGCTTGAATCCGATATTAAAACTGATCCAATAATAAGTCGCATATACTATGTAACAAGTGAAGAACTAAACAACATGCAATCACAAGCTAACTCAAACAATAGTGGCAGTGTTAAGCGGTCAAAACTTGAATCATTTTCTGCTTTACTGTGGAAGATGGTTGCCGCGGCGGCTTCAACTGATAATGAAAATATTGTGGCAAAAATGGGGTTGGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGCTCATATTTCGGGAATGTGCTCTCAATTCCCTATGGTGGTAGATTGGCAAACGAATTGGTTGAAAATCCATTAAGTTGGGTGGCAGACCGAGTTCATAATTTTTTGGAGGAGGCAGTGACGGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCAGTTCCAGGGTTGGCGAGGATATATTGTGGTAGCACTGGTGGAGAAGAGGGCCCGACATTTGTTGTGTCATCCGGCCAACGGTTTCCGGAGTCGAAGGTGGATTTTGGATGGGGGAAGCTTGTGCTTGGATCTTATCATTTTCCTTGGGGTGGACCGGGTGGTGGTGCTGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTCAATTAA 1347 0.4313 MSIGKVEFNVNMTNEETVAAALPMQEHWLPLSNLDLILPPVDVTETLVSYYAFAGEVVKNSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLVPKKKHGVLAVQATWMKCGGLVVACTFDHRIADAYSANMFLVSWAEIARPKNNKLFIPTTQPCFRRSLLTPRRPPSIHPSLYDMYVPLSDLPPPPAPELESDIKTDPIISRIYYVTSEELNNMQSQANSNNSGSVKRSKLESFSALLWKMVAAAASTDNENIVAKMGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRLANELVENPLSWVADRVHNFLEEAVTEEHFLGLIDWVEEHRPVPGLARIYCGSTGGEEGPTFVVSSGQRFPESKVDFGWGKLVLGSYHFPWGGPGGGAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04661 448 Gene3D - 197 432 IPR023213 -
Trre10g04661 448 Pfam Transferase family 45 432 - -
Trre10g04661 448 Gene3D - 4 184 IPR023213 -
Trre10g04661 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 30 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04661 Trre-Chr10 55327470 55329238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04661 43 431 Monolignol Biosynthesis Gene Families AT5G48930 25.693 3.26e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04661 - - gmx:100809201 601.668