Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04660 ATGAGTATTGGAAAAGTTGAATTCAATGTGAATATGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTATGGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGCAATAACCGTGGTGTTGATTTTGTTGAAGCTTTTGCTGATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAAGTGTTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTTCTTGCTGTTCAGGCAACATGGATGAAATGTGGTGGATTAGTAGTGGCATGCACTTTTGACCATCGTATAGCGGATGCCTATTCTGCAAATATGTTCCTTGTATCTTGGGCTGAGATAGCCCGACCCAAGAATAACAAATTATTCATTCCAACAACACAACCTTGTTTTCGGAGATCTCTTTTGACCCCACGACGCCCACCTTCCATCCATCCTTCACTTTATGACATGTACGTCCCCCTCTCTGATCTACCTCCTCCACCTGCACCTGAGCTTGAATCCGATATTAAAACTGATCCAATAATAAGTCGCATATACTATGTAACAAGTGAAGAACTAAACAACATGCAATCACAAGCTAACTCAAACAATAGTGGCAGTGTTAAGCGGTCAAAACTTGAATCATTTTCTGCTTTACTGTGGAAGATGGTTGCCGCGGCGGCTTCAACTGATAATGAAAATATTGTGGCAAAAATGGGGTTGGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGCTCATATTTCGGGAATGTGCTCTCAATTCCCTATGGTGGTAGATTGGCAAACGAATTGGTTGAAAATCCATTAAGTTGGGTGGCAGACCGAGTTCATAATTTTTTGGAGGAGGCAGTGACGGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCAGTTCCAGGGTTGGCGAGGATATATTGTGGTAGCACTGGTGGAGAAGAGGGCCCGACATTTGTTGTGTCATCCGGCCAACGGTTTCCGGAGTCGAAGGTGGATTTTGGATGGGGGAAGCTTGTGCTTGGATCTTATCATTTTCCTTGGGGTGGACCGGGTGGTGGTGCTGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTCAATTAA 1308 0.432 MSIGKVEFNVNMTNEETVAAALPMQEHWLPLSNLDLILPPVDVMVKNSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLVPKKKHGVLAVQATWMKCGGLVVACTFDHRIADAYSANMFLVSWAEIARPKNNKLFIPTTQPCFRRSLLTPRRPPSIHPSLYDMYVPLSDLPPPPAPELESDIKTDPIISRIYYVTSEELNNMQSQANSNNSGSVKRSKLESFSALLWKMVAAAASTDNENIVAKMGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRLANELVENPLSWVADRVHNFLEEAVTEEHFLGLIDWVEEHRPVPGLARIYCGSTGGEEGPTFVVSSGQRFPESKVDFGWGKLVLGSYHFPWGGPGGGAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04660 435 Gene3D - 42 171 IPR023213 -
Trre10g04660 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 51 396 - -
Trre10g04660 435 Gene3D - 184 419 IPR023213 -
Trre10g04660 435 Pfam Transferase family 46 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04660 Trre-Chr10 55327470 55329238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04660 44 418 Monolignol Biosynthesis Gene Families AT5G48930 25.326 1.56e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04660 - - gmx:100809201 581.637