Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04659 ATGTGTATTGGAAAAGTTGAATTCATTGTGAATATGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTGTTCTTTTGCTACAATAAACCTATAATTGCTATTGGCACCCACCATAATATTATTGAGTGTTTGAAAAATTCATTAGCTGAGACTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTGGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGCAACAACCGTGGTGTTGATTTTATTGAAGCTTTTGCTGATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAAGTGTTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTTCTTGCTGTTCAGGCAACATGGATGAAATGTGGTGGATTAGTAGTGGCGTGCACTTTTGACCATCGGATAGCAGATGCCTATTCTGCAAACATGTTCTTTGTATCTTGGGCTGAGATAGCTCGGCCCAAGAATAACAAATCTTTCATTCCAACAATACAACCTTGTTTTCGAAGATCTCTTTTGACCCCACGACGCCCACCTTCCATCCATCCTTCACTTTATGACATGTACGTCCCTGTCTCTGATCTACCTCCTCCACCTGAGCTTGAATCTGATATTAAAACTGATCCAATAATAAGTCGCATATATTACGTAACAAGTGAAGAACTCAACAACATGCAGTCACTAGCCAACTCAAACAATAGTGGTAGTGTTAAGCGGTCAAAACTTGAATCATTTTCTGCTTTACTATGGAAGATGGTTGCCGAGACCACTTCAACCAATAAAGAAAATATTTTTGCAAAAATGGGGTTAGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGTTCCTATTTTGGGAACGTGCTTTCCATTCCCTATGGTGGTAGATCGGCGAACGAGTTGGTTGAAAATCCATTAAGTTGGGTGGCAGACCGAGTTCATGATTTTTTGGAGGAGGCAGTGACGGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCGGTTCCAGGGTTGGCGAGGATTTATTGTGGTAGCACCGGGGGAGAAGAGGGCTCGACATTTGTTGTGTCATCCGGCCAAAGGTTTCCCGAGTCGAAGGTGGATTTTGGATGGGGAAAGCCTGTGCTTGGATCTTACCATTTTCCTTGGGGTGGTGATGCTGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTTAATTAA 1413 0.419 MCIGKVEFIVNMTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPIIAIGTHHNIIECLKNSLAETLVSYYAFAGEVVKNSMGEPELLCNNRGVDFIEAFADVELQSLNLYNPDESVEGKLVPKKKHGVLAVQATWMKCGGLVVACTFDHRIADAYSANMFFVSWAEIARPKNNKSFIPTIQPCFRRSLLTPRRPPSIHPSLYDMYVPVSDLPPPPELESDIKTDPIISRIYYVTSEELNNMQSLANSNNSGSVKRSKLESFSALLWKMVAETTSTNKENIFAKMGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRSANELVENPLSWVADRVHDFLEEAVTEEHFLGLIDWVEEHRPVPGLARIYCGSTGGEEGSTFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGDAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04659 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 431 - -
Trre10g04659 470 Pfam Transferase family 10 454 - -
Trre10g04659 470 Gene3D - 222 454 IPR023213 -
Trre10g04659 470 Gene3D - 9 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04659 Trre-Chr10 55317898 55319623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04659 10 453 Monolignol Biosynthesis Gene Families AT5G48930 24.619 9.63e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04659 - - gmx:100809201 674.085