Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04638 ATGAATCATCTCCATATGCTGCTATGCTTGCTGCACAAGATGTTGCTACATGATGCAAGTTGTTATTACAAGGCATTTATCATTAACTGCCAACATTTGTTGATTCTATGTATTATGGAACATGAGTTGGGCATTACTGCTCTTCATATCAAGCTCCGTGCAATTGGAGGAAACAAGAACAAAACACCAGGTCCTGGTGCTCAGGCTGATCGCACGTTCAGGAATGAAAATTGGTCGCATAGAGGCAATGAAATTCAGGTGGGGATTGGGCAAAAAATCAAAGGCGAAACTTCTGTAATTTATGTTAGACGATGTAAGAATGTTGCATTTGTTTTAGTTGGTGTAACTAGGAAGGTAGGTGCTACATGTTGGATTGGAAATGTTCCGTCTCGTTTCTCTCATTACTTGTAA 411 0.399 MNHLHMLLCLLHKMLLHDASCYYKAFIINCQHLLILCIMEHELGITALHIKLRAIGGNKNKTPGPGAQADRTFRNENWSHRGNEIQVGIGQKIKGETSVIYVRRCKNVAFVLVGVTRKVGATCWIGNVPSRFSHYL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04638 136 Gene3D Ribosomal protein S11 17 108 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04638 Trre-Chr10 55126028 55127684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04638 17 69 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 54.717 2.09e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04638 K02955 - cave:132163430 55.8398