Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04629 ATGTCAGATTCAGATGACTCCTTAGGGGATGCAGGAGGTGGTTTGCCTCAAGAACCACCTCCTCATAGCAATGGATTCATAGAGGATCATAACAATGCAGGAGGAGAAGGATTTGCTAATGGATTTCACGCTGAAGAAGATGATAATGGATGGGGAGCAGACCAAGTTGCTGAGCTGAATTACTGGCTAGACCAACCCGATGAACCAGACATGGAAGAACAAGCTCAAGAACCCCATGATTCTGACGTGGAAATGGAAGAACAAGCTCAAGAACCCCATGATTCTGACGTGGACATGGAAGATCCAGCTCAAGAATCGGATGATTCTGACGAAGAACGTCCCTTTGGCGAATGGACCCAACAGGAGAAAGAATTGTTTGAGATAGCATTGCACGAAGAGGGACGTGATTGGGGAAGAATTTCAATGTTTCATGTCACGACTCGGAGTGCTTCCGACTGTCAATACTACTACACGTTCCTGCGGCAATGA 489 0.4663 MSDSDDSLGDAGGGLPQEPPPHSNGFIEDHNNAGGEGFANGFHAEEDDNGWGADQVAELNYWLDQPDEPDMEEQAQEPHDSDVEMEEQAQEPHDSDVDMEDPAQESDDSDEERPFGEWTQQEKELFEIALHEEGRDWGRISMFHVTTRSASDCQYYYTFLRQ 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04629 162 ProSiteProfiles Myb-like domain profile. 110 161 IPR001005 -
Trre10g04629 162 MobiDBLite consensus disorder prediction 76 99 - -
Trre10g04629 162 Gene3D - 118 162 - -
Trre10g04629 162 ProSiteProfiles SANT domain profile. 113 162 IPR017884 -
Trre10g04629 162 Pfam Myb-like DNA-binding domain 116 157 IPR001005 -
Trre10g04629 162 CDD SANT 117 157 IPR001005 -
Trre10g04629 162 SUPERFAMILY Homeodomain-like 116 160 IPR009057 -
Trre10g04629 162 MobiDBLite consensus disorder prediction 1 120 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre10g04629 Myb_DNA-binding 5.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04629 - K16175 lvr:T8T21_06610 46.2098