Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04598 ATGTTAAGAGTTTCTCAAATTCGTGTTGGTTTTGCGATTCCAAAACTCTCTCCACTTTCATCAATTCCTTCACTCTTCTCTTTCTCTTTTCCTTCTCATTCTCACTCTCAAATCCACACTTTTTCTTCCACAAAAACCTTCCATTTTCATTCACCTTCTTCTCTTCCTCTTTCACCCTTTACTTCAATCATGTCTCTGAAAGCATCAGCTTCATATAGTAGTGGTGTTGAAGGTGGAGGTGAAAGGGAAATATTGGTGCAGCATTTGTTGGTGAAAGAAGATGACCAAAAACTATTATTGGATATTCAAAAGAGAGTTGCTGCAGGTGAAGATTTGAGTGATCTCGCCGTGGACCATTCAATTTGCCCTTCTAAAGATGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCGTTTAGTGCACCTTTAAACAAAGTTGTAAGATGCAAGACAAAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCAGTACTTCAAGACATTAAACCGGATGAGCTGCATGTGAAATTTCAAGATCCCAACTTTTTGGAGGAGGCACAGTTAATTGATGTTCGCGAGCCTGAAGAAGTGGCCACAGCATCTTTGCCAGGATTTACAGTTCTTCCCCTCCGGCAATTTGGAAGCTGGGGGCCTGAAGTAAACACCAAATTTGACCCTCAAAAGGATACATATGTTCTGTGTCATCACGGCGTGCGGTCGTTACAGGTTGCCAGGTGGTTGCAGTCACAGGGGTTCAGGAAAGTATACAATATTTCTGGAGGAATCCATGCCTATGCAGTTCAGGTCGATCCGTCAGTTCCTACATACTGA 870 0.4287 MLRVSQIRVGFAIPKLSPLSSIPSLFSFSFPSHSHSQIHTFSSTKTFHFHSPSSLPLSPFTSIMSLKASASYSSGVEGGGEREILVQHLLVKEDDQKLLLDIQKRVAAGEDLSDLAVDHSICPSKDEGGMLGWVRKGQMVPEFEEAAFSAPLNKVVRCKTKFGWHLLQVLSEREESVLQDIKPDELHVKFQDPNFLEEAQLIDVREPEEVATASLPGFTVLPLRQFGSWGPEVNTKFDPQKDTYVLCHHGVRSLQVARWLQSQGFRKVYNISGGIHAYAVQVDPSVPTY 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04598 289 Gene3D - 79 174 IPR046357 GO:0003755
Trre10g04598 289 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 81 171 IPR000297 GO:0003755
Trre10g04598 289 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 289 - -
Trre10g04598 289 Gene3D - 175 286 IPR036873 -
Trre10g04598 289 Pfam PPIC-type PPIASE domain 91 171 - -
Trre10g04598 289 SUPERFAMILY FKBP-like 82 170 - -
Trre10g04598 289 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 177 287 IPR036873 -
Trre10g04598 289 SMART rhod_4 181 284 IPR001763 -
Trre10g04598 289 Pfam Rhodanese-like domain 189 279 IPR001763 -
Trre10g04598 289 ProSiteProfiles Rhodanese domain profile. 195 287 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04598 Trre-Chr10 54785020 54788387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04598 82 289 Sulfurtransferasese or Rhodanese AT5G19370 66.346 2.25e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04598 - - aprc:113846694 443.351