Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04579 ATGGAACAGAGAAGAAAATCTTCAACATCATCATCATGGTTTCTTCTATTCTCATTTCTTTCTTGTCTTTTTCTCTCTAATTTTTTAGGATCTGTTGGAGCTTACAAAAATTACACAGTTGGAGATTCTTTAGGTTGGTTTGACAAACTTGAAAAACCTACTGTTGATTACCAGAAGTGGGTTGCCAAGAAAGAATTCAGCTTAGGAGATTTCCTCATTTTCAACACAGACAATAACCACTCTCTTGTACAAACATACAACTTCACCACATACAAACTATGTGATTATGATGATGCAATAGACAAGGATACAGTCCAATGGTCATCTGCTGATCCGTCAAACACCGGGATACAACCGGTGACAGTGGCGGTTCCTTTACTGAAGGAAGGAGCAACATATTTCTTCTCGAGTGATTATGATGGCGAACAGTGCAAAAATGGACAACATTTTAAAATAAATGTGACTCATGGACAAGGGTTGCCGAAGAGTCTTCGATCCTCTGATGATGCTCCATCTCCTATTAGTCCAATTTCTGGTGATGACGAGTCAGCACCAGACACAAATGTTCCTTCTAATTTCAATAATCCTAAGGAAGATAAAGACGATGAAAAAAGTACTGATAAAGATGACAAAGATAACGAGAAATCTAATTCTAATTCTATTTTAAAGTATACACAACTTCACAACAAGTTGTATAGGTGTCTTGTCTTGTTAGGGACATTTTTCTTGTTTTAG 735 0.3673 MEQRRKSSTSSSWFLLFSFLSCLFLSNFLGSVGAYKNYTVGDSLGWFDKLEKPTVDYQKWVAKKEFSLGDFLIFNTDNNHSLVQTYNFTTYKLCDYDDAIDKDTVQWSSADPSNTGIQPVTVAVPLLKEGATYFFSSDYDGEQCKNGQHFKINVTHGQGLPKSLRSSDDAPSPISPISGDDESAPDTNVPSNFNNPKEDKDDEKSTDKDDKDNEKSNSNSILKYTQLHNKLYRCLVLLGTFFLF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04579 244 MobiDBLite consensus disorder prediction 195 217 - -
Trre10g04579 244 SUPERFAMILY Cupredoxins 36 154 IPR008972 -
Trre10g04579 244 ProSiteProfiles Phytocyanin domain profile. 36 156 IPR003245 GO:0009055
Trre10g04579 244 Gene3D - 35 159 IPR008972 -
Trre10g04579 244 MobiDBLite consensus disorder prediction 158 217 - -
Trre10g04579 244 Pfam Plastocyanin-like domain 46 148 IPR003245 GO:0009055
Trre10g04579 244 FunFam Early nodulin-like protein 18 35 157 - -
Trre10g04579 244 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Trre10g04579 244 PANTHER BLUE COPPER PROTEIN 36 175 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04579 Trre-Chr10 54613995 54615777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04579 19 244 Phytocyanin Superfamily AT1G08500 56.332 1.00e-76 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04579 - - ccaj:109789262 290.041