Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04559 ATGCATGAGCTTGGAATCAAAGAATGGTGTAAAATGGCTAAACAGTTGCCTGGAAGATCAGATAATGATATAAAGAATTTTTTTAATTCAAGAGCAAGAAAACTAAATAGAAACCTTAAATTGAGTGGTTCCAGCAGCAAGCAAGTTGATGATGAGATGAATGAAAACAACTACTCTGAACAACTTCCAAAGGTTGTTGATGATTCAAATAAGCAGCTTCCAAAGTTGTCAAAGTTGGTTGATGATTCAAGGATGCTCTACAACAATGTGGAAAGTACTTCTATAAGCAATCATACTACCCCAACATCATGGATTAATAGGGCTAGCATTGGAACTTTTATGCATGATGCCAGGGTACCAAATCCATCTCCATTCTCACCATATTTTGACCAAAATATGGACTATCCACATCCTTCAATTAAACACAATTTGCATAGAAAATATCCATCAAGGTATGATGAGATAATTAAAAACAACTCTAAACAACTTCCAAACTTATTTGATGTTCCAAAGTGGGTTGATGTTTCAAATAAGCACTACAAAAACGTGGGAAGTGCTTCTACAAGCAATCAAACTGCCCCAACAAGGAATAATAGGGTACCATATCAAAATATGAACTATTCACCTCCTTCATTGGAACATAGTTTATATGGAAAATATCCATCAATATCTGATGAGATAAATAAAAACAACTCTGAACAGCTTTCAAACTCATTCCAAGTCCCAAATAAGGAGCTTCCAGAGTTGGTTTGTGATTCAAATATGCTCAACAGTAATGTGGGAAGTATTTCTACAAGCAATCTTACTACCCCAACATGCATTAATAGGTGTGGCAATGGAACTTCTAGTAAGCAATTTACCATGGTGCCAAATCCACTCCCACCATGTTCATACGTTCAAAATATGGACTGTCAACTTCCTCCTTATAAGAAGTTAGGTGAGTATCCTCAAAATCCACTTCCACCACCTATGGAAGCTCAATATCAGATGACAGAATCAGTTTCTCCATATAGAAATTTGGTTGATGAAAAAGGGAAGAAGCCAATTTCTTTTGAGAATGATTTTGGAGCAAATTTCGTTAGCAATTTTACAGATCCATATCTTTGCCATGGCTCAAGATTATTAGACAATGACGGTAACAATAACTTGAATGACAAGCTTCCACGCGATGTAAATGATACCTTAGACGTGGCTATAAATGAGGATGACATAGATTGGGATACTTTGTCTGACTTAGGTTCATTAGACAACGACGATAACAATAACTTGCGTGACAAGATTCCACATGATATAAAGGATACCTTAGACGCGGTTATATATGGAAAAAGCTTCCATCCTAAGTGA 1344 0.3609 MHELGIKEWCKMAKQLPGRSDNDIKNFFNSRARKLNRNLKLSGSSSKQVDDEMNENNYSEQLPKVVDDSNKQLPKLSKLVDDSRMLYNNVESTSISNHTTPTSWINRASIGTFMHDARVPNPSPFSPYFDQNMDYPHPSIKHNLHRKYPSRYDEIIKNNSKQLPNLFDVPKWVDVSNKHYKNVGSASTSNQTAPTRNNRVPYQNMNYSPPSLEHSLYGKYPSISDEINKNNSEQLSNSFQVPNKELPELVCDSNMLNSNVGSISTSNLTTPTCINRCGNGTSSKQFTMVPNPLPPCSYVQNMDCQLPPYKKLGEYPQNPLPPPMEAQYQMTESVSPYRNLVDEKGKKPISFENDFGANFVSNFTDPYLCHGSRLLDNDGNNNLNDKLPRDVNDTLDVAINEDDIDWDTLSDLGSLDNDDNNNLRDKIPHDIKDTLDAVIYGKSFHPK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04559 447 CDD SANT 2 29 IPR001005 -
Trre10g04559 447 Gene3D - 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04559 Trre-Chr10 54460219 54464054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04559 1 37 MYB Transcription Factor Family AT2G26960 51.351 2.56e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04559 K09422 - tpra:123922667 320.087