Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04533 ATGGAGGTTTTGAGTTTTACAAAAAATATGTTGTTGATGATGATGATGATGAGTGCTATGATGTGGAACATGGCAAAATCTGAGGAACACTTTGTTGGGGGGAATAACCATTCATGGGTAGTTGGTAATAACTTCACCAATTGGTCATTGAATCAGCACTTTCATTTGAATGATTGGCTATTCTTTGGATATGACAGACGCTATTTCAGTGTGCTAGAGGTGAACAAAACAAGTTATGAAAACTGCATAGATACAGGATTCATTAAGAACATAACCGGAGGCGCCGGACGAGACGTTTTTCAGCTGACAGAGGAGAAGACTTATTACTTTATAAATGCAGGAGGTTACTGTTGGCAAGGCATGAAGGTTGCCATTGATGTTAATGATTATGCACCAGCTCCTGCACCTACCCCTGGTGCTTCTGCTATTAATGCTTCTAATATCTACGTGCTCATCTTAATCTTGATGTTCACCAGCTTCTTTGGATAA 489 0.3967 MEVLSFTKNMLLMMMMMSAMMWNMAKSEEHFVGGNNHSWVVGNNFTNWSLNQHFHLNDWLFFGYDRRYFSVLEVNKTSYENCIDTGFIKNITGGAGRDVFQLTEEKTYYFINAGGYCWQGMKVAIDVNDYAPAPAPTPGASAINASNIYVLILILMFTSFFG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04533 162 FunFam Lamin-like protein 26 130 - -
Trre10g04533 162 SUPERFAMILY Cupredoxins 28 127 IPR008972 -
Trre10g04533 162 Gene3D - 27 131 IPR008972 -
Trre10g04533 162 ProSiteProfiles Phytocyanin domain profile. 28 129 IPR003245 GO:0009055
Trre10g04533 162 Pfam Plastocyanin-like domain 39 121 IPR003245 GO:0009055
Trre10g04533 162 PANTHER BLUE COPPER PROTEIN 20 132 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04533 Trre-Chr10 54276002 54277512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04533 11 161 Phytocyanin Superfamily AT2G27035 42.581 6.45e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04533 - - mtr:11434723 191.045