Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04526 ATGTTTGGATTAGGAGCAAGTAGGAAAGGAATGCAGGCTATCTGGTTGATGCTGTTGTTGGTGGTGAATATTACATTAGGGAATTCAGATATTGATGCACTTCTTGAACTCAAGAAGGGTATTAAAAATGACCCTTTTGGATTAGTTCTTAATTCTTGGGATTCAAAGTCATTAGACTCTAATCAATGTCCACAAAATTGGTATGGAATATTATGCAGTGAAGGCAATGTTTTATCTATCACTTTGGATAATGCTGGTTTGGTTGGAGAGTTTAATTTCCTTGCAATTAGTACCCTTACAATGCTTCACAATTTGTCACTTGTAAACAACAACTTCACAGGAAGTATGTTACATATTAGTCCGATGAAATCACTTAAATATCTCGATTTGTCTCTCAACAAGTTCACCGGCTCACTTCCTCCTAGCTTCGTCGAACTGCATAGTTTAGTGTATCTGAATCTTTCTTCAAATGATCTTAGTGGCACTATTCCGAACGTGTTTCACAAACTTGACCAGTTGAAGTATTTAGATTTTCATGGTAATAGCTTTTCGGGCGATATTATGAATATCTTTTATCAGATGGGAAGTGTGTTACATGTTGACTTAAGCAAAAACAAGTTTTCTGGTACACTTGATTTGGGACTTGGAGATGTTTCATTTCTATCTTCGATTCAACATTTGAATGTTAGTCATAATTCCTTGGTTGGTGAACTATTTGCTCATGATGGTATGCCATATCTCGATAATTTAGAGGTCTTTGATGCTAGTAATAATCAGCTAGTTGGTGATATACCTTCTTTCACGTTTGTCGTATCGCTAAGGATTCTTCGACTTGCATGCAATCAGTTGACAGGTTCTCTGCCAGAAGCTTTGTTGAAGGAAAGTTCAATGGTGTTGTCTGAACTCGATCTTAGTCAAAACAAGCTTGAAGGTTTCATCGGAAGCATTACTTCAATGACTCTCAGGAAGCTTAATATATCTTCAAACAAATTGTCAGGTCCATTACCTCTCAAAGTAGGTCATTGTGCCGTCATAGATTTGAGTAATAACGTGCTGTCAGGTAACTTGTCAAGGATCAAGTATTGGGGGAACTATGTGGAAGTTATTCAGTTAAGCACTAACTTTTTGTCCGGAACTCTGCCGAACGAAACAACGCAATTTTTAAGGTTAACTTCACTTAAGGTTTCCAATAACTCATTGGAGGGATTTCTACCACCAGTTTTAGGAACATATCCGGAGCTAAACGAGATTGATCTTAGTCTCAACCGGCTTTCTGGTTTCCTCCTACCAACCCTTTTCGTCTCGACCAAATTGACTACTCTTAATCTCTCAAACAATGAGTTTTCTGGTCCAATTCCTTTTCAACTTCCAAATAGTAATTCATTGGTTTCTGCCGAAAATTTTAGTTTGACGGCTCTTGATCTTTCAAACAACAATTTGAGTGGAATTCTTTCTTCGAAAATTAAGGAGCTTCATAATTTGGCATATCTTAATCTATGTAACAACAAATTGGAAGGCACTATTCCTAATGATCTTCCAGATGAATTAAGAGGATTCAATGTGTCCTTTAATAATTTTTCTGGCGCTGTACCTCGTAACTTATTGAAGTTTCCCGAGTCATCATTTCATCCAGGAAATACTATGCTGCTATATCCAAATTCTCAATTATCACCAAAAGATACTTCAATCTTAGGTTTGAGGTCACATAAGAACTATTTTCCTAGGAGTGTCTTGATTACGTGTTTGGTTACCGGCGTTTTTGTGATTGCTATTATGGCTGCTATGGTTTACTATAGGATTCATCAGAAAAAAGAAAGAACTTCTAAACAAGATGCAAAAACAAGTGACATCATCCAAGAGAATACTTCTCCATCAAACAGAAGAAATTTGGAATCAATACCGCCTTCTCAAAGTGATGATACCGGAAACATTAATCCAACCTTAAAGAAGGCTAAAGATCCCGAGTTAGTTAAGAACGAAGAAGGAACGTCTTCTCCAATGTCTATTTTATCGGCTTCGAATCCTTCACCTTCTACAAGTCATCAGTTCGAGAATCCAAGCCCTCTCAAAGTATCGTCTCCGGATAAACTAGTTGGTGACTTGCATCTATTTGATGGATCGTTGATGTTAACTGCGGAAGAGCTTTCGTGCGCTCCAGCTGAAGTTATTGGTAGGAGTTGTCATGGAACACTTTACAAAGCTACACTTGAATCTGGTCATGTTTTGGCTGTTAAATGGTTAAGAGAAGGAATAACGAAAGGAAAAAAGGAGTTAGCGAGGGAAATTAAGAAACTCGGGACAATCAAGCATCCAAGCTTAGTTTCTCTTCTTGGTTGCTACTTAGGGCCGAAGGAGCATGAGAGACTGATTATATCAAATTACATGAATGCATATTCTTTAGACATTTATCTCCATGAGGCTGATAAAAGAAATCTTCATCCTTTGTCTGTTGATGAAAGGCTCAGGGTGGCCGTAGAAGTGGCGCGATGTTTACTTTATCTGCACACCGAGAAAGCCATACCTCATGGCAATCTTAAATCCACAAACATTCTAATAGAAACTCCAAACAGAAATGTCTTGCTCACTGATTACAGCCTGCACCGAATACTCACCGCTGCTGGTACTTCCGAGCAAATTCTGAATGCCGGTGCACTTGGTTACCGACCGCCCGAGTTTGCTAGATCAACCAAACCATGCCCTTCCTTGAAAAGTGATGTCTATGCATTCGGAGTTGTCTTGTTAGAGCTCTTATCAGGAAGAAAATCCGGAGAAATTGTTTACGGGATTTCTGGCGTGGTTGAACTTACCGAATGGGTGAGATTCTTAGCTGAACAAGGTCGCTCTAACCAATGCTTCGAAAAATCCCTGGTGGAAAATCACCACGGAGACGGACCGTTTATGATTCTTGATAACATGCTAAAAGTAGCTCTTAGATGCATCCTTCCAGCATCTGAGAGACCTGATATGAAAACAGTCTTTGATGATCTTTCAACAATAAGGGAAAGTTGA 3009 0.3875 MFGLGASRKGMQAIWLMLLLVVNITLGNSDIDALLELKKGIKNDPFGLVLNSWDSKSLDSNQCPQNWYGILCSEGNVLSITLDNAGLVGEFNFLAISTLTMLHNLSLVNNNFTGSMLHISPMKSLKYLDLSLNKFTGSLPPSFVELHSLVYLNLSSNDLSGTIPNVFHKLDQLKYLDFHGNSFSGDIMNIFYQMGSVLHVDLSKNKFSGTLDLGLGDVSFLSSIQHLNVSHNSLVGELFAHDGMPYLDNLEVFDASNNQLVGDIPSFTFVVSLRILRLACNQLTGSLPEALLKESSMVLSELDLSQNKLEGFIGSITSMTLRKLNISSNKLSGPLPLKVGHCAVIDLSNNVLSGNLSRIKYWGNYVEVIQLSTNFLSGTLPNETTQFLRLTSLKVSNNSLEGFLPPVLGTYPELNEIDLSLNRLSGFLLPTLFVSTKLTTLNLSNNEFSGPIPFQLPNSNSLVSAENFSLTALDLSNNNLSGILSSKIKELHNLAYLNLCNNKLEGTIPNDLPDELRGFNVSFNNFSGAVPRNLLKFPESSFHPGNTMLLYPNSQLSPKDTSILGLRSHKNYFPRSVLITCLVTGVFVIAIMAAMVYYRIHQKKERTSKQDAKTSDIIQENTSPSNRRNLESIPPSQSDDTGNINPTLKKAKDPELVKNEEGTSSPMSILSASNPSPSTSHQFENPSPLKVSSPDKLVGDLHLFDGSLMLTAEELSCAPAEVIGRSCHGTLYKATLESGHVLAVKWLREGITKGKKELAREIKKLGTIKHPSLVSLLGCYLGPKEHERLIISNYMNAYSLDIYLHEADKRNLHPLSVDERLRVAVEVARCLLYLHTEKAIPHGNLKSTNILIETPNRNVLLTDYSLHRILTAAGTSEQILNAGALGYRPPEFARSTKPCPSLKSDVYAFGVVLLELLSGRKSGEIVYGISGVVELTEWVRFLAEQGRSNQCFEKSLVENHHGDGPFMILDNMLKVALRCILPASERPDMKTVFDDLSTIRES 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04526 1002 SUPERFAMILY L domain-like 468 537 - -
Trre10g04526 1002 SUPERFAMILY L domain-like 30 318 - -
Trre10g04526 1002 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 238 - -
Trre10g04526 1002 Gene3D Phosphorylase Kinase; domain 1 715 794 - -
Trre10g04526 1002 SUPERFAMILY L domain-like 245 463 - -
Trre10g04526 1002 Pfam Leucine rich repeat 102 159 IPR001611 GO:0005515
Trre10g04526 1002 Gene3D Ribonuclease Inhibitor 364 464 IPR032675 -
Trre10g04526 1002 Gene3D Ribonuclease Inhibitor 465 555 IPR032675 -
Trre10g04526 1002 Gene3D Ribonuclease Inhibitor 27 191 IPR032675 -
Trre10g04526 1002 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Trre10g04526 1002 PRINTS Leucine-rich repeat signature 470 483 - -
Trre10g04526 1002 PRINTS Leucine-rich repeat signature 491 504 - -
Trre10g04526 1002 Pfam Leucine Rich repeat 318 333 IPR001611 GO:0005515
Trre10g04526 1002 Pfam Leucine Rich repeat 467 481 IPR001611 GO:0005515
Trre10g04526 1002 Pfam Leucine Rich repeat 435 450 IPR001611 GO:0005515
Trre10g04526 1002 ProSiteProfiles Protein kinase domain profile. 717 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04526 1002 SUPERFAMILY Protein kinase-like (PK-like) 720 996 IPR011009 -
Trre10g04526 1002 MobiDBLite consensus disorder prediction 604 692 - -
Trre10g04526 1002 Gene3D Ribonuclease Inhibitor 192 363 IPR032675 -
Trre10g04526 1002 Gene3D Transferase(Phosphotransferase) domain 1 795 1002 - -
Trre10g04526 1002 MobiDBLite consensus disorder prediction 614 645 - -
Trre10g04526 1002 Pfam Protein tyrosine and serine/threonine kinase 721 994 IPR001245 GO:0004672|GO:0006468
Trre10g04526 1002 MobiDBLite consensus disorder prediction 661 689 - -
Trre10g04526 1002 PANTHER OS07G0626500 PROTEIN 15 111 - -
Trre10g04526 1002 FunFam Leucine-rich repeat receptor-like protein kinase 702 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04526 Trre-Chr10 54187121 54190649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04526 79 999 Receptor kinase-like Gene Family AT5G07280 28.763 1.01e-75 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre10g04526 PK_Tyr_Ser-Thr 9.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04526 - - psat:127117920 1628.99