Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04476 ATGATTATGGGTAAGTACAGACACAAAAATATAGTTCCCCTGCTTGGGTTCTACATTGAAGAAAAGGAAAGGCTTTTGGCATACACATACATGTCAAATGGAAGGCTTTCTAAATGGTTGCATCCACTGAAAAATGAAGTTATGAGATTGAAATGGCCTGAGAGAGCCAACATTGCATTTGGAATAGCAGGTGGATTATCACGGGTCCATCATAGCTGTGATTTGAGCATAGTACATTTTAATAAATGTTCAGAATGCATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGGGAGGCCAAATTTATGAATCCCAACATTGAAGATGACCTCGGCATAATGTTTAAAGTACACGACGGAAAGAAGGATGTTTATGACTTGGAAAGTGTGCTTTTTGAACTGATTACAGGGAAAACATATAATGAACTGACGCCTTCATCTACCACCACTAATTTCTATGATAACCCTTCAAATTTTTATAATTCCATTGATAAATCTCTAATTGGGGAAGGATTTGAAAATGAAGCATGTGCTCTCTTAAAGTTAAAAATTGCTTCTATTGACGATTCTAACTCAACCGGGGGATAG 597 0.3635 MIMGKYRHKNIVPLLGFYIEEKERLLAYTYMSNGRLSKWLHPLKNEVMRLKWPERANIAFGIAGGLSRVHHSCDLSIVHFNKCSECILLDENFEPKISNFGEAKFMNPNIEDDLGIMFKVHDGKKDVYDLESVLFELITGKTYNELTPSSTTTNFYDNPSNFYNSIDKSLIGEGFENEACALLKLKIASIDDSNSTGG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04476 198 Gene3D Transferase(Phosphotransferase) domain 1 32 194 - -
Trre10g04476 198 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04476 198 Gene3D Phosphorylase Kinase; domain 1 1 31 - -
Trre10g04476 198 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 188 - -
Trre10g04476 198 Pfam Protein tyrosine and serine/threonine kinase 2 106 IPR001245 GO:0004672|GO:0006468
Trre10g04476 198 SUPERFAMILY Protein kinase-like (PK-like) 2 166 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04476 Trre-Chr10 53855426 53856022 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04476 3 141 Receptor kinase-like Gene Family AT4G39400 38.065 3.95e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Trre10g04476 Pkinase 4.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04476 - - mtr:112421135 291.197