Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04437 ATGACATGGTCTACCAGGTTGCGAATTGCTTTGGATGTAGTGAGAGGCCTCGAGTATATTCATGATCATTCAGTGCCTGTATATATCCATCGCGACATAAAATCAGATAATATTTTATTAAATGGAAACTTCAATGGGAAGATTGCAGATTTTGGAATGACCAAACTGACTGATGTTGCAAGTTCAACAGATAACACTGATCATGTCGCTGGCACATTTGGTTACATGCCGCCTGAAAATGCATATGGCCATATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTGTACGAACTAATTTCTGCTAAAGCAGCTGTGGTCAAAATTGATAAACGAAGTACCGAGTTCAAGAGCCTTGAGATTAAGTCCAATGATTCTATTGATGAATACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATTGAACAAGAGGTAGATCCTATGGAAGGTCTAAGAAAGATGGTGGATCCAAGGCTAGGAGATAACTATTCAATTGATTCCATTAACAAGATGGCACAGCTGGCAAAGGCTTGCATAAACCGAAATCCGAAACAACGTCCAAGAATGGGAGATGTTGTAGTTTCTCTAATGAAACTAAATTTTACAATTGATGATGGAAGTAGGAGAGATGGTGCAGCATTGAGTCTGGCTATAGAGCATGACTAA 672 0.3884 MTWSTRLRIALDVVRGLEYIHDHSVPVYIHRDIKSDNILLNGNFNGKIADFGMTKLTDVASSTDNTDHVAGTFGYMPPENAYGHISRKIDVYAFGVVLYELISAKAAVVKIDKRSTEFKSLEIKSNDSIDEYKSLVALFDEVIEQEVDPMEGLRKMVDPRLGDNYSIDSINKMAQLAKACINRNPKQRPRMGDVVVSLMKLNFTIDDGSRRDGAALSLAIEHD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04437 223 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 208 IPR044812 GO:0019199|GO:0045087
Trre10g04437 223 SMART serkin_6 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04437 223 SUPERFAMILY Protein kinase-like (PK-like) 1 199 IPR011009 -
Trre10g04437 223 Pfam Protein kinase domain 8 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04437 223 ProSitePatterns Serine/Threonine protein kinases active-site signature. 28 40 IPR008271 GO:0004672|GO:0006468
Trre10g04437 223 Gene3D Transferase(Phosphotransferase) domain 1 1 212 - -
Trre10g04437 223 FunFam PTI1-like tyrosine-protein kinase 3 1 211 - -
Trre10g04437 223 PIRSF ILK 1 212 - -
Trre10g04437 223 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04437 Trre-Chr10 53571626 53572844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04437 1 201 Receptor kinase-like Gene Family AT3G21630 53.234 1.55e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre10g04437 Pkinase 6.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04437 - K13429 tpra:123920651 349.362