Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04403 ATGTCATCTTCTATCACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCAAGAACACACTCATGCCATTAGAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCTTCCCTTGATGATATTGAATCAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGCCATGAAAAGGCAAAGGAAACAGTTATGTATTCTTACAATAAGCACATAAATGGATTTGCTGCATTACTTGAAGATGAAGAGGCAACAAAGATTGCAAAGAACTCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAATTGCACACTACTAGGTCATGGGAATTTCTTGGACTGGAAAAAGATGGTGGAATTTCTCTTGATTCTGCTTGGTGGATGGCCAGATTTGGTGAAGATACAATCATGGCAAATTTAGATTCAGGTGTTTGGCCAGAACATGAAAGTTTCAGAGACATTGGATATGGTCCAGTTCCATCAAAGTGGCATGGAAATGGAGTATGTGAGATTGATCATTTTATTACTACTTCAAATACAACAACATTCTGCAATAGGAAGCTAATTGGAGCAAGAATATTTAGCAAAAACTACGAAGCACAATTTGGAAAACTCCACCCTTCAAACCTCACAGCGCGTGACTTTGTTGGCCATGGTACACACACCTTATCAACAGCCGCGGGTAACTTTTCACCCAATGTAACAATATTTGGTAACGGTAATGGCACAGCAAAAGGTGGGTCCCCTAGAGCGCGTGTAGCGTCCTACAAAGTGTGTTGGTCAAAAACTGATGCAGGTGGATGTCACGAAGCTGATATTCTAGAAGCATTTGATCATGCTATATATGATGGTGTTGATGTAATTTCAATCTCTTTGGGTGGTTCTGATCCATATATTGAAGCTTTGTTCACTGATGGAATTTCAATTGGTTCATTTCATGCTGTTGCTAAGAATGTTGTAGTTGTTTGTTCTGCTGGAAATGATGGACCAGCTCCTAGAACTGTAACAAATGTAGCACCTTGGTCTTTCACAGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGTCACATTTTTATTGGTAACAAACATTACATGAAGGGTGCTAGTCTTAGTAAAGGCTTACCAACAGGTCCATCGAAGAAAAAGAAAATATATCCGATGATTCATTCTATCGATGCTAGATTTCCTAATGCCACAATTCAAGATGCCCGTTATTGCAAGCCTGGAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTTTGCATTCGACTTGACGAAATAACATCGATTGCTCAAGGCTTTGAAGCTGCTATTGCAGGTGCAGTAGGAGTTTTTGTGATGAATGATAAGAAAAGTGGAAATGTACTTCTAGCTGAGCCTCATCCTTTACCCGGTGCAAGTATGGATTGCAATGAAGACGAAGATATTGATGAACGTGAATGGTTAGGAAAAGGTGGTAGTGACAATAACATAACTAGGAAAATGGTTGCATACATGGATGCTGCAAGAACATATATAGGATTAAAGCCAGCTCCAATTGTGGCTGGATTCTCATCTAGGGGACCTAGTGCAGTGCAGCCATTGATACTTAAGCCCGACATAACAGCTCCTGGAGTGAATATATTGGCTGCTTATTCACTAGCCACTAGTCCTTCCAATCTACCATCAGACACACGTCGAGTTCCTTACAATCTTCAACAAGGAACTTCTATGTCTTGTCCTCATGTTGCTGGCATTGTTGGTCTTCTGAAGACACTTCATCCTACTTGGAGTCCAGCCGCTATCAAATCAGCCATCATGACTACAGCTACCACACTAGATAACACCAATCAGCCGATTCGGAATGCATTCGATAAGATATCAATTCCATTTGAATATGGTTCTGGACATATTCAACCTAACCTTGCAATGGATCCGGGACTTGTTTATGATCTAACCACGACCGATTACTTGAACTTCATATGTGCATCTGGTCACAATCAAAACTTACTCAAGTTCTTCAATAACAACTCTTACACTTGTCCCGAGTCTTACAATATCGAAAATCTCAACTATCCTTCAATTACCGTAACTAATCGAGGATTGAACACTATAAATGTTACTCGTACCGTAACAAATGTTGGGTCTCCTAGCACATATATTGTTGAAACTCGCCAACTTGAAGACTTTAAGGTTCATGTTCATCCAAATTCCTTGACATTTAAGAAAATTGGAGAAAAGAAAACCTTTCAGGTAATTATGGAGGCAATTAGTTGGCCTCCACATGGTTTTCCGGTTTTTGGGAAATTGACTTGGACAAATGGAAAACATAGAGTAACTAGTCCTATTGTAGTTCTTTAA 2379 0.3901 MSSSITKLFLSSFILCSFLQEHTHAIRKTYIVYLGGHSHGPNPSLDDIESATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEATKIAKNSNVVSVFLSKEYKLHTTRSWEFLGLEKDGGISLDSAWWMARFGEDTIMANLDSGVWPEHESFRDIGYGPVPSKWHGNGVCEIDHFITTSNTTTFCNRKLIGARIFSKNYEAQFGKLHPSNLTARDFVGHGTHTLSTAAGNFSPNVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILEAFDHAIYDGVDVISISLGGSDPYIEALFTDGISIGSFHAVAKNVVVVCSAGNDGPAPRTVTNVAPWSFTVAASTIDREFVSHIFIGNKHYMKGASLSKGLPTGPSKKKKIYPMIHSIDARFPNATIQDARYCKPGTLDPTKVKGKILVCIRLDEITSIAQGFEAAIAGAVGVFVMNDKKSGNVLLAEPHPLPGASMDCNEDEDIDEREWLGKGGSDNNITRKMVAYMDAARTYIGLKPAPIVAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLATSPSNLPSDTRRVPYNLQQGTSMSCPHVAGIVGLLKTLHPTWSPAAIKSAIMTTATTLDNTNQPIRNAFDKISIPFEYGSGHIQPNLAMDPGLVYDLTTTDYLNFICASGHNQNLLKFFNNNSYTCPESYNIENLNYPSITVTNRGLNTINVTRTVTNVGSPSTYIVETRQLEDFKVHVHPNSLTFKKIGEKKTFQVIMEAISWPPHGFPVFGKLTWTNGKHRVTSPIVVL 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04403 792 ProSiteProfiles Serine proteases, subtilase domain profile. 118 650 - -
Trre10g04403 792 Gene3D - 667 792 - -
Trre10g04403 792 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Trre10g04403 792 FunFam Subtilisin-like protease SBT5.3 18 114 - -
Trre10g04403 792 ProSitePatterns Serine proteases, subtilase family, serine active site. 581 591 IPR023828 -
Trre10g04403 792 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 114 IPR037045 -
Trre10g04403 792 CDD PA_subtilisin_like 370 482 - -
Trre10g04403 792 SUPERFAMILY Subtilisin-like 113 654 IPR036852 GO:0004252|GO:0006508
Trre10g04403 792 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Trre10g04403 792 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Trre10g04403 792 PRINTS Subtilisin serine protease family (S8) signature 580 596 IPR015500 -
Trre10g04403 792 CDD Peptidases_S8_3 111 617 IPR034197 -
Trre10g04403 792 Gene3D Peptidase S8/S53 domain 144 663 IPR036852 GO:0004252|GO:0006508
Trre10g04403 792 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 791 IPR045051 -
Trre10g04403 792 Pfam Subtilase family 142 621 IPR000209 GO:0006508|GO:0008236
Trre10g04403 792 Gene3D - 361 519 - -
Trre10g04403 792 FunFam Subtilisin-like protease SBT1.5 144 372 - -
Trre10g04403 792 Pfam Fibronectin type-III domain 695 791 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04403 Trre-Chr10 53281467 53287050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04403 29 791 Subtilisin-like Serine Gene Family AT2G04160 51.895 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04403 - - gmx:100794135 1237.25