Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04391 ATGGAATACCTTTATGGATTTGCGTCTGCTATTTCAAGAGATTTAGTGTGTGGTGTAATAGGTCAATTAAGTTATCCATGCTGCTTCAACAGTTTTGTTCAAGACCTTGCAAAAGAAGAAGGTAATTTGGCTGCAACAAGAGATAGTGTCCAAGACCGCGTTACACGTGCTAAGAAGCAAACTAGAAAGACTGCTGAAGTTGTTGATAAGTGGTTGAAGGAAGCTAACATTGGCATGGACAATGTTGATCAGTTACTACAAATGGCAAAAACAGAAAAGAACTCATGTCTTGGGCACTGTCCAAATTGGATTTGGCGATACCGTGTTGGCAGGAAGTTAGCAAAGAAAAAAAGGGACCTTAAATTGTGCATTGAAGAAGGTAGACAATATATACAGATTGAACGCCCTGCTTCACTTTCAGCAGGCTATCTTTCTTCTGAAAAATGTTGGGAGTTTGATAGTAGAAAACCTGCTTATGAGGAACTTATGTGTGCTTTGGAAGATGATGATGTTACTATGATTGGATTGTATGGGATGGGGGGTTGTGGCAAAACAATGCTTGCAATGGAAGTAGGCAAGAGATGTGGTCATCTTTTTGATCAAGTGGTTTTTGTGCCTATATCTAGTACTGTAGACGTGGAAAGGATCCAGGAAAAAATTGCAGGCTCTCTTGAATTTGAATTCCAAGGAAAAGACGAAATGGACAGATCACAACGCTTATGCATGAGGTTCACCCAAGAAGATAGGGTTCTTGTGATTCTGGATGATGTGTGGCAGATGCTAGATTTTGATGCCATAGGGATTCCTTCTAGTGAACATCATAAAGGTTGCAAGGTTCTCATCAGCAGTAGATCTGAAGCCGTTTGTACTTTGATGGATTGCCAGAAAAAAATTCATCTATCAACACTAACCAATGATGAAACGTGGGATCTTTTCCAAAAGCAAGCACTCATATCTGAATGCACTTCGATTACTGTGAAGAATTTGGCTAGAGAAATTTCAAATGAATGTAAAGGCCTGCCTGTCGCCATTGTAGCGGTGGCTAGCAGCTTGAAAGGCAAGGCTGAGGTGGATTGGAAGGTTGCATTGGATAGATTAAGAAGTTCGAAACATGTTAATATTGAAAAAGGTTTGCAAAACCCGTACAAGTGCTTGCAGTTAAGCTATGATAATTTGGACACTGAAGAGGCCAAGTCACTTTTCTTGTTGTGTTCTGTGTTTCCTGAAGATTGTGAAATTCCTGTGGAGTTTTTAACTAGGTCTGCAATAGGGCTAGGTATAGTTGGAGAAGTTCACTCATATGAAGGGGCGAGGGACGAAGTGAGTGTGGCTAAAAATAAGCTCATAAGTTCTTGTTTATTGCAAGATGTTGATGAAGGAAAATGTGTCAAAATGCATGATTTAGCTCGCAATGTAGCTCATTGGATTGCAGAGAACAAGATTAAGTGTTCCTCAGAAAAGGATATTATAACTTTGAAAAATACTTCCTTAAGATATCTATGGTGTCAGAAATTTCCAAATCATTTGGATTGTTCCAATCTTGACTTTCTACACATTCACATCTATACGCAAGACGTATCAGATGAAGTTTTCAAAGGAATGAGAATGCTCAGAGTTTTGTTTCTTTACAATAAGGGTCAGGAGAGAAGGTTGTTGTTGACTACATCATTAAAATCATTGACGAATCTTCATTGCATACTCCTGAGTAAATGGGATTTAGTTGATATATCATTTGTGGGAGATATGAAGAAACTTGAAAGTCTTACATTGTGTGATTGTTCATTCCTTGAATTACCTGATGTGGTTACACAACTGACTAACTTGAGACTGTTGGATTTGTCAGAATGTGACATGAAAATGAATCCGTTCGAAGTGATTGGGAGACACAGACAGCTGGAAGAATTGTACTTTGCTGATTGTAAATCAAAATGGGAAGTTGAATTCTTAAAAGAGTTTAGTGTCCCCCAAGTGTTACAGAGGTATCAAATACAATTAGGAAGCATGTTTTCTGGTTTCCAAGAAGAGTCTCTCAATCATCACAGGACTTTGTTTCTCAGTTATTTGGATATATCTAATGCCGCGATCAAGGATTTGGCTGAAAAGGCCGAGGTCTTGTGTATAGCAGGTATTGAGGGAGGTGCTAAGAGTATCATCCCTGACATATTTCAAAGTATGAACCATTTAACTGAGCTTTTGATACGCGATACTAAGGGGATAGAGTGTTTGGTTGACACTTGTCTGATTGAGGTCGGAACTCTCTTCTTCTGCAAGTTGCATTGGCTCAGAATTGAGCACATGGAGCATTTGGAAGCTTTATACAACGGTCGAATGCCTCTAGGTGGTCATTTTGAGAATTTAGAAGACCTATATATAAGTCATTGTCCAAAGCTAGCATGTCTCTTCACACTTGCAGTTGCACAAAATCTGGCACAACTGGAGAAATTACAAGTATTATCTTGCCCTGCACTGAAGCATATACTAATTGATGATGATGATAGAGAGGAGATTATTGTATATGATCACAGACCGTTGTTTCCAAAATTAAAAGAGCTTCATGTTAGAGAGTGTAGTGAGCTGGAATACATAATCCCAATAACTTTAGCTCAAGGCCTTGTCCAATTGGAGTGTTTGGAAATCGTATGTAATCATAAGTTGAGATATGTATTTGGCCAAAGCACACATAAAGATGGTCAGAATCAGAATGAAATCAAGATCGAGCTGTCGGCCCTGCAAGAGCTTACTCTTGTTATATTGCCAAATATCAATAGCATTTGTCCAGAAGATTGTTATCTAATGTGGCCATCCCTGCTTAGTTTCAATTTGCAAAATTGTGCAGAGTTTTTCATGGTGTCTATCAATACTTGCATGGCTTTACACAACAATCCGATGATCAATAAAGCCTCGCATCAAACTCTGCAAAATATTAAAGAAGTTCGAGTCAATAACTGCGAGTTAGAAGGTATCTTTCAGCTAGTAGGAATACCCATTGATGGAGAAAAAGATCCACCGACATCATGTTTGGAAATGTTGTATTTGGAGAATCTACCTCAGCTCAGATATGTATGTAAGAGTGATGTAGAATCAACAAATCTCCAATTCCAAAATCTTCAACAAATGGAGATATGTGGATGTAGAAGATTAAAATGTATCTTCTCATCCTGTATGGTTGGAGGGCTACCTCAACTGAAAGCGCTAAAGATAGAAAAGTGCAATCAGCTAGATAAAATCGTTGAGGATATCGGTACTGCAGTTCCCTTAGGATCATTTGGTCTTCCCAGCCTTGTAAGGTTAACACTAATATCATGTCCGATGTTGGGTTCATTGTTCACAGCATCCACTGCTAAAACCTTGAATTCATTGGAAGACTTGACAATACAAGATTGCCATGGTTTAAAGCAATTAGTATCTTATGGAAGAACTCAGCAAAATAGAAGGGGAGAAATAGTTCAGGATGATCTTGATGACTTTCAGAGTTATAAGTCAATATTTCAAAGTTTGAAAAGGATTAGTATTATGAGATGTCATTTGCTCAAGTGTATATTACCTGTTTCATTTGCAAGAAAACTGGTGAAATTGGAAGCTATAGAAATCACAGAGACTCCTGAGTTGAGATATGTATTCGGTCATTCTACCCATCAATATCCAAACAAGTTCAAAATTGAGCTTCCTGTTTTGGGGAAAGTTGCATTCTACGATATACCAAATATGATTGACATTTGTCCAGAAAACTATCATGCAACATGCTCATCTTTGCAACTTCTTGTCATTAACGATGTTGGTCTATCAATGAACAATTTGATGGTTGATTCTGGAGCCACACACTCAGATCTTAGTTCTAATAAAACAGATGAAGGAGAAACAAGTATGCGTATTGAGAAGAAGTCAATATCTGTTATTATTGAGAACGGATCCGAAATGGAAGGCATTTTTCAAATGAAGGGATCCCCAAGTGAGAATGGACAACAAGTGATGTCTTGGTTAGAAGACCTTAAATTGAACAATTTGCCAAAGCTAATGTACATATGGATGGGTGCCAAACAACATTGTGTGAGCCTTCAACATCTTCGCAAAATACACATTTGCAACTGTCCAAAACTGAAGTCTATCTTCTCCATCTCTGTCCTGAGAGTCCTGCCTCTGTTGAAGATCCAAGTGCTAGAACAATGTGAGGAGTTAGAGCAAATCATTGAAGATGACGACGAAGAAAATGAAAATGTCCCGAATCCTCAAGTGTGCTTCTCACAGCTAAAGTTTCTTCTCGTCACCCAATGCAACAAATTGAAGCATTTGTTTTATATCCACACATCCCATGAGTTTCCAGAATTGGAATATCTGACCCTCAATCAAAATTCTAGTCTAGTTCAAGTGTTTAAAGTTGGTTCTGGTGTGCGAGAAGGGACAGCGGAAGTTTTGCTTCCAAAACTGAAACATGTAATGCTAATGCAACTGCCAAATCTCAATGATATATGTCAAGGGATTGAGTTTCAGACTCTCACCAATCTTTTGGTGCAAAATTGCCCAAAATTCTCACTTCCTTCAACGAATACTAACGAGGACATGTTACAAACCTGTGATAATGACAAGGAAATTGGTTTCTATCTCCGTCCACTCTTACACGAGATAAGTTGTACAACAACAAATGGCCACGAGTTCCTTACATCAAAGAACAACACCAATGGGATGCAAGATTTACAATCGCAGGAGCAGAAACTGTCACTCATTCCTTTACCAAACTTGACAGAGGAGTTTGTTAAAGGACAAACAATGGATGAACCATGTTTGATGAGACAACAAAAGCCACTTGGAGAATCTAGGGTTACTGAAGAGGAAATCACATCAAAGAATGCAGAAGAGATAGTAGTTTCGCCAATTCATTCTGAATCTGATAGCTCACATTCAGACCCATTAGCTACCTCTCAACGTAAACCACTTTCACATCATGAAATCAGCTTCAGCCAAACCGAGACTTACACTAATAAAGAAAACAAAGACCATCCTGCAAATATAGGTGACTTGGAGGACATTGATCTCAAACCTGTCGAAGAGGTTGATGAAAGTCAAATTGTCACACCTTGTATTTCTGAAGCAACTGCAGTGCGTCATTCAACCAAAGATAACTTCGTTGAAAAGGCTCTTTCTGACCTAGAAGAGTCTTTGAGGATACCTCTAAGGGACATAGCTAGCTCAGAGGCTAACAGTCTTCGCCTTCTAACGGCTCTTAACTTCTTGTCCCACCTTTCTTTAAAAGATGTAGCTCTGCCAGATGGACTCCAAGCTGTAATTGACACTATGCACACAGAATTCCCAACCATCCTATGCTCCTTCAAGCAAGCCTTTTCTATAACAGACAAATTTTCTGTGACTGAAGCTCAACAGAGGGAAGAAGCTTTAAAGGAACAGATCATTCAATTGGAGAAAGAAGTAAAATGTCTTCAAGAGGAAAAGGAAAAATGCATTCAAGAAACTATAGGCTACAAAATGGAATTGGAGAATGTGATGAAAAACAAGTATGAAATTGTGGAAGATCAAATGAAAGCTCGGCAACAAATATTTGAGGTCGATTATAAATGGTCTGCTCTACTTAGTCAGTTTCAGTACAACCACATTGTTGCAAGAAATCCTTCTTGA 5628 0.3861 MEYLYGFASAISRDLVCGVIGQLSYPCCFNSFVQDLAKEEGNLAATRDSVQDRVTRAKKQTRKTAEVVDKWLKEANIGMDNVDQLLQMAKTEKNSCLGHCPNWIWRYRVGRKLAKKKRDLKLCIEEGRQYIQIERPASLSAGYLSSEKCWEFDSRKPAYEELMCALEDDDVTMIGLYGMGGCGKTMLAMEVGKRCGHLFDQVVFVPISSTVDVERIQEKIAGSLEFEFQGKDEMDRSQRLCMRFTQEDRVLVILDDVWQMLDFDAIGIPSSEHHKGCKVLISSRSEAVCTLMDCQKKIHLSTLTNDETWDLFQKQALISECTSITVKNLAREISNECKGLPVAIVAVASSLKGKAEVDWKVALDRLRSSKHVNIEKGLQNPYKCLQLSYDNLDTEEAKSLFLLCSVFPEDCEIPVEFLTRSAIGLGIVGEVHSYEGARDEVSVAKNKLISSCLLQDVDEGKCVKMHDLARNVAHWIAENKIKCSSEKDIITLKNTSLRYLWCQKFPNHLDCSNLDFLHIHIYTQDVSDEVFKGMRMLRVLFLYNKGQERRLLLTTSLKSLTNLHCILLSKWDLVDISFVGDMKKLESLTLCDCSFLELPDVVTQLTNLRLLDLSECDMKMNPFEVIGRHRQLEELYFADCKSKWEVEFLKEFSVPQVLQRYQIQLGSMFSGFQEESLNHHRTLFLSYLDISNAAIKDLAEKAEVLCIAGIEGGAKSIIPDIFQSMNHLTELLIRDTKGIECLVDTCLIEVGTLFFCKLHWLRIEHMEHLEALYNGRMPLGGHFENLEDLYISHCPKLACLFTLAVAQNLAQLEKLQVLSCPALKHILIDDDDREEIIVYDHRPLFPKLKELHVRECSELEYIIPITLAQGLVQLECLEIVCNHKLRYVFGQSTHKDGQNQNEIKIELSALQELTLVILPNINSICPEDCYLMWPSLLSFNLQNCAEFFMVSINTCMALHNNPMINKASHQTLQNIKEVRVNNCELEGIFQLVGIPIDGEKDPPTSCLEMLYLENLPQLRYVCKSDVESTNLQFQNLQQMEICGCRRLKCIFSSCMVGGLPQLKALKIEKCNQLDKIVEDIGTAVPLGSFGLPSLVRLTLISCPMLGSLFTASTAKTLNSLEDLTIQDCHGLKQLVSYGRTQQNRRGEIVQDDLDDFQSYKSIFQSLKRISIMRCHLLKCILPVSFARKLVKLEAIEITETPELRYVFGHSTHQYPNKFKIELPVLGKVAFYDIPNMIDICPENYHATCSSLQLLVINDVGLSMNNLMVDSGATHSDLSSNKTDEGETSMRIEKKSISVIIENGSEMEGIFQMKGSPSENGQQVMSWLEDLKLNNLPKLMYIWMGAKQHCVSLQHLRKIHICNCPKLKSIFSISVLRVLPLLKIQVLEQCEELEQIIEDDDEENENVPNPQVCFSQLKFLLVTQCNKLKHLFYIHTSHEFPELEYLTLNQNSSLVQVFKVGSGVREGTAEVLLPKLKHVMLMQLPNLNDICQGIEFQTLTNLLVQNCPKFSLPSTNTNEDMLQTCDNDKEIGFYLRPLLHEISCTTTNGHEFLTSKNNTNGMQDLQSQEQKLSLIPLPNLTEEFVKGQTMDEPCLMRQQKPLGESRVTEEEITSKNAEEIVVSPIHSESDSSHSDPLATSQRKPLSHHEISFSQTETYTNKENKDHPANIGDLEDIDLKPVEEVDESQIVTPCISEATAVRHSTKDNFVEKALSDLEESLRIPLRDIASSEANSLRLLTALNFLSHLSLKDVALPDGLQAVIDTMHTEFPTILCSFKQAFSITDKFSVTEAQQREEALKEQIIQLEKEVKCLQEEKEKCIQETIGYKMELENVMKNKYEIVEDQMKARQQIFEVDYKWSALLSQFQYNHIVARNPS 1875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04391 1875 Gene3D - 388 474 IPR036388 -
Trre10g04391 1875 MobiDBLite consensus disorder prediction 1658 1674 - -
Trre10g04391 1875 Gene3D Ribonuclease Inhibitor 475 901 IPR032675 -
Trre10g04391 1875 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 961 1135 - -
Trre10g04391 1875 Pfam NB-ARC domain 165 391 IPR002182 GO:0043531
Trre10g04391 1875 PRINTS Disease resistance protein signature 603 619 - -
Trre10g04391 1875 PRINTS Disease resistance protein signature 337 351 - -
Trre10g04391 1875 PRINTS Disease resistance protein signature 173 188 - -
Trre10g04391 1875 PRINTS Disease resistance protein signature 244 258 - -
Trre10g04391 1875 MobiDBLite consensus disorder prediction 1624 1657 - -
Trre10g04391 1875 FunFam Probable disease resistance protein At1g61300 153 297 - -
Trre10g04391 1875 Gene3D Ribonuclease Inhibitor 902 1145 IPR032675 -
Trre10g04391 1875 SUPERFAMILY RNI-like 1015 1376 - -
Trre10g04391 1875 Coils Coil 1382 1402 - -
Trre10g04391 1875 Coils Coil 1787 1821 - -
Trre10g04391 1875 MobiDBLite consensus disorder prediction 1596 1674 - -
Trre10g04391 1875 Gene3D Ribonuclease Inhibitor 1234 1459 IPR032675 -
Trre10g04391 1875 SUPERFAMILY L domain-like 464 940 - -
Trre10g04391 1875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 404 IPR027417 -
Trre10g04391 1875 Gene3D - 145 299 IPR027417 -
Trre10g04391 1875 Gene3D - 302 387 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04391 Trre-Chr10 53177320 53188456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04391 170 640 WRKY Transcription Factor Family AT5G45050 23.034 5.85e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04391 - - cam:101501248 2961.4