Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04367 ATGGTGTCTTGCAAGATTAGAAACCATATACCAGCAGTAATTGTGTTTGGTGATTCCTCTGTTGATTCTGGAAACAACAATAAGATAGCAACACTTCTCAAGAGCAACTTTAAACCTTATGGCCGCGACTTCGAAGGTGGCCGCCCCACCGGACGGTTTTGTAATGGCCGTGTTCCACCGGACTTCATCGCGGAGGCTTTTGGTGTTAAGAAAAATATACCGGCGTATTTGGATCCTGCTTATACCATTGATGATTTTGTCACTGGTGTTTGTTTTGCTTCTGCTGGAACTGGATATGATAATGCAACTTCTGATGTACTAAATGTAATACCATTATGGAAGGAGATAGAGTACTTCAAGGAGTATCAAGAAAAATTGAGAGCTCATGTTGGTAAAGAGAAGGCAAATTATATAATAAGTGAAGCATTATACCTAATAAGCTTAGGAACCAATGATTTCTTAGAAAACTACTATGTTTTCCCGACAAGACAATTTCATTTCACCGAATCACAATATCAAGATTTTCTAGTAGATATTGCAGAGAATTTTGTTAGGAAAATATATTCACTTGGTGCTAGGAAATTATCCATAACTGGCCTTATTCCTATGGGGTGTCTCCCATTAGAGAGGGCAACAAATTTTTTAGATGACCATGGTTGCAATGAAAAATACAACATTGTGGCTTTGGAATTTAATGCCAAATTGGAAAATATGATATCAAAGGTAAATAATGAGCTCCCACAATTGAAGGCTTTGTCGGCAAATGCTTATGATGTTCTCAATGATATCATTACACGTCCTTCCTTCTATGGATTTGAGGAGGCAGAGAAGGCATGTTGTTCCACAGGAACATTTGAGATGAGCTACTTATGTAGTGATAAGAATCCATTTACATGCAAAGATGCAAATAAATATGTGTTTTGGGATGCCTTTCATCCTACTGAAAAGACAAACCACATAGCTTCAAACTATTTAATCCCTAAACTTTTTGCTACTTTTAGATGA 1005 0.3721 MVSCKIRNHIPAVIVFGDSSVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSDVLNVIPLWKEIEYFKEYQEKLRAHVGKEKANYIISEALYLISLGTNDFLENYYVFPTRQFHFTESQYQDFLVDIAENFVRKIYSLGARKLSITGLIPMGCLPLERATNFLDDHGCNEKYNIVALEFNAKLENMISKVNNELPQLKALSANAYDVLNDIITRPSFYGFEEAEKACCSTGTFEMSYLCSDKNPFTCKDANKYVFWDAFHPTEKTNHIASNYLIPKLFATFR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04367 334 Gene3D SGNH hydrolase 3 330 IPR036514 -
Trre10g04367 334 SUPERFAMILY SGNH hydrolase 13 329 - -
Trre10g04367 334 Coils Coil 232 252 - -
Trre10g04367 334 PANTHER GDSL ESTERASE/LIPASE EXL3 10 325 - -
Trre10g04367 334 CDD SGNH_plant_lipase_like 11 328 IPR035669 -
Trre10g04367 334 FunFam GDSL esterase/lipase APG 2 329 - -
Trre10g04367 334 Pfam GDSL-like Lipase/Acylhydrolase 13 325 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04367 Trre-Chr10 52949481 52954615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04367 6 326 Pollen Coat Proteome AT1G75910 37.730 7.74e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04367 - - gmx:100809260 577.015