Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04366 ATGAGGCTAATTACATGCATATTCATACCATTACTAATAATGATAACACAAATTATCATGGTGTCTTGCAAGATTAGAAACCATATACCAGCAGTAATTGTGTTTGGTGATTCCTCTGTTGATTCTGGAAACAACAATAAGATAGCAACACTTCTCAAGAGCAACTTTAAACCTTATGGCCGCGACTTCGAAGGTGGCCGCCCCACCGGACGGTTTTGTAATGGCCGTGTTCCACCGGACTTCATCGCGGAGGCTTTTGGTGTTAAGAAAAATATACCGGCGTATTTGGATCCTGCTTATACCATTGATGATTTTGTCACTGGTGTTTGTTTTGCTTCTGCTGGAACTGGATATGATAATGCAACTTCTGATGTACTAAATGTAATACCATTATGGAAGGAGATAGAGTACTTCAAGGAGTATCAAGAAAAATTGAGAGCTCATGTTGGTAAAGAGAAGGCAAATTATATAATAAGTGAAGCATTATACCTAATAAGCTTAGGAACCAATGATTTCTTAGAAAACTACTATGTTTTCCCGACAAGACAATTTCATTTCACCGAATCACAATATCAAGATTTTCTAGTAGATATTGCAGAGAATTTTGTTAGGAAAATATATTCACTTGGTGCTAGGAAATTATCCATAACTGGCCTTATTCCTATGGGGTGTCTCCCATTAGAGAGGGCAACAAATTTTTTAGATGACCATGGTTGCAATGAAAAATACAACATTGTGGCTTTGGAATTTAATGCCAAATTGGAAAATATGATATCAAAGGTAAATAATGAGCTCCCACAATTGAAGGCTTTGTCGGCAAATGCTTATGATGTTCTCAATGATATCATTACACGTCCTTCCTTCTATGGATTTGAGGAGGCAGAGAAGGCATGTTGTTCCACAGGAACATTTGAGATGAGCTACTTATGTAGTGATAAGAATCCATTTACATGCAAAGATGCAAATAAATATGTGTTTTGGGATGCCTTTCATCCTACTGAAAAGACAAACCACATAGCTTCAAACTATTTAATCCCTAAACTTTTTGCTACTTTTAGATGA 1062 0.3663 MRLITCIFIPLLIMITQIIMVSCKIRNHIPAVIVFGDSSVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSDVLNVIPLWKEIEYFKEYQEKLRAHVGKEKANYIISEALYLISLGTNDFLENYYVFPTRQFHFTESQYQDFLVDIAENFVRKIYSLGARKLSITGLIPMGCLPLERATNFLDDHGCNEKYNIVALEFNAKLENMISKVNNELPQLKALSANAYDVLNDIITRPSFYGFEEAEKACCSTGTFEMSYLCSDKNPFTCKDANKYVFWDAFHPTEKTNHIASNYLIPKLFATFR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04366 353 CDD SGNH_plant_lipase_like 30 347 IPR035669 -
Trre10g04366 353 FunFam GDSL esterase/lipase APG 21 348 - -
Trre10g04366 353 Gene3D SGNH hydrolase 20 349 IPR036514 -
Trre10g04366 353 Pfam GDSL-like Lipase/Acylhydrolase 32 344 IPR001087 GO:0016788
Trre10g04366 353 Coils Coil 251 271 - -
Trre10g04366 353 SUPERFAMILY SGNH hydrolase 32 348 - -
Trre10g04366 353 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Trre10g04366 353 PANTHER GDSL ESTERASE/LIPASE EXL3 15 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04366 Trre-Chr10 52949424 52954615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04366 11 345 Pollen Coat Proteome AT1G75910 36.471 5.73e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04366 - - gmx:100805486 582.022