Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04364 ATGAGGCTTATATGCATATTCATAGCATTACTAATATTGATAACACAAATTATTATGGTGGCTTGCAAGACTAGAAATCATATACCAGCAGTAATTGTGTTTGGTGACTCTACTGTTGATTCTGGAAACAACAATAAAATAGCAACACTTGTAAAGAGCAACTTTAAACCTTACGGCCGCGATTTTGAAGGTGGCCAACCTACCGGCCGGTTTGGTAATGGTCGTGTTCCATCGGATTTTATTGCTGAGGCTTTTGGTGTTAAGAAAAATATACCAGCATATTTGGATCCTGCTTATACCATTGATGATTTTGTCACCGGTGTTTGCTTTGCCTCAGCTGGAACTGGATATGATAATGCAACTTCACATGTGGTAAATGTAATACCACTATGGAAGGAGATAGAGTACTTCAAGGAGTATCAAGAAAAATTGAGAGCCCATGTTGGTCAAGAGAAAGCAAATTATATAATAAGTGAAGCATTATACCTAATAAGCTTAGGAACCAATGATTTCTTATTAAACTACTATGTATCACCAAGAAGACAACTTCATTTCACCGAATCACAATATCAAGATTTTCTAGTGGATATTGCAGAGAATTTTGTTAGGAAAATATATTCACTTGGTGCTAGGAAATTATCCATAACTGGTCTTGTTCCTATTGGGTGTCTACCATTAGAGAGGACTATAAATATTTTAGGTGATCATAATTGCAATGAAAAATACAACAATGTGGCTTTGGAATTTAATGCCAAATTGGAGAATATGATATCAAAGGTAAATAATGAGCTCCCACAATTGAAGGCTTTGTCAGCAAATGCTTATGATATTGTCAACGATATCATTGCACGACCTTCCTTCTATGGATTTGAGGTGGTAGAGAAGGCTTGTTGTTCAACTGGAACATTTGAGCTAAGCTACTTATGCAGTGATAAGAATCCACTTACATGCAAAGATGCAAACAAATATGTGTTTTGGGATGCCTTTCATCCTACCCAGAAGACAAACTACATTGTTTCAAATTATTTAATCCCTAAACTTCTAGCAGCATTTAGATGA 1059 0.3579 MRLICIFIALLILITQIIMVACKTRNHIPAVIVFGDSTVDSGNNNKIATLVKSNFKPYGRDFEGGQPTGRFGNGRVPSDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSHVVNVIPLWKEIEYFKEYQEKLRAHVGQEKANYIISEALYLISLGTNDFLLNYYVSPRRQLHFTESQYQDFLVDIAENFVRKIYSLGARKLSITGLVPIGCLPLERTINILGDHNCNEKYNNVALEFNAKLENMISKVNNELPQLKALSANAYDIVNDIIARPSFYGFEVVEKACCSTGTFELSYLCSDKNPLTCKDANKYVFWDAFHPTQKTNYIVSNYLIPKLLAAFR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04364 352 Coils Coil 250 270 - -
Trre10g04364 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Trre10g04364 352 FunFam GDSL esterase/lipase APG 20 347 - -
Trre10g04364 352 SUPERFAMILY SGNH hydrolase 31 347 - -
Trre10g04364 352 PANTHER GDSL ESTERASE/LIPASE EXL3 13 343 - -
Trre10g04364 352 CDD SGNH_plant_lipase_like 29 346 IPR035669 -
Trre10g04364 352 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Trre10g04364 352 Gene3D SGNH hydrolase 18 349 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04364 Trre-Chr10 52939206 52946038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04364 4 344 Pollen Coat Proteome AT1G75910 35.159 9.00e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04364 - - gmx:100809260 569.696