Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04362 ATGAAGCTTATATGCATATTCATACCATTACTAATAATGATAACACAAATTATCATGGTGTCTTGCAAGATTAGAAACCATGTACCAGCAGTAATTGTGTTTGGTGATTCTTCTGTTGATTCTGGAAACAACAATAAGATAGCTACACTTCTCAAGAGCAACTTTAAACCTTATGGCCGCGACTTCGAAGGTGGCCGCCCCACCGGACGGTTTTGTAATGGCCGTGTTCCACCGGACTTCATCGCGGAGGCTTTTGGTGTTAAGAAAAATATACCGGCGTATTTGGATCCTGCTTATACCATTGATGATTTTGTCACTGGTGTTTGCTTTGCTTCTGCTGGTACTGGATATGATAATGCAACTTCTAATGTACTAAATGTGATACCACTATGGAAGGAGGTGGAGTACTTCAAGGAGTATCAAGAAAAATTGAGAGCTCATGTTGATATTGCAGAGAATTTTGTTAGGAAAATATATTCACTTGGTGCTAGGAAATTATCCATAACTGGCCTTATTCCTATGGGGTGTCTCCCATTAGAGAGGGCAACAAATATTTTAGGTGACCATGATTGCAATGAAAAATACAACAATGTTGCTAAGCAATTTAATGTTAAATTGGAAAATATGATATCAAAGATAAGTAAGGAGCTCCCACAATTGAAAGCTTTGTCTGCAAATCCTTATCATATTTTCAATGATATCATTACAAGACCTTCCTTCTATGGATTTGAGGAGGCAGAGAAGGCATGTTGTTCTACTGGAACATTTGAGATGAGCTACTTATGTAGTGATAAAAATCCATTTACATGTAAAGATGCAAACAAATATGTGTTTTGGGATGCCTTTCATCCTACTGAAAAGACAAATCGCATAGCTTCAAATCATTTAATCCCTAAACTTCTAGCAGCATTTAGATGA 918 0.3715 MKLICIFIPLLIMITQIIMVSCKIRNHVPAVIVFGDSSVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSNVLNVIPLWKEVEYFKEYQEKLRAHVDIAENFVRKIYSLGARKLSITGLIPMGCLPLERATNILGDHDCNEKYNNVAKQFNVKLENMISKISKELPQLKALSANPYHIFNDIITRPSFYGFEEAEKACCSTGTFEMSYLCSDKNPFTCKDANKYVFWDAFHPTEKTNRIASNHLIPKLLAAFR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04362 305 Pfam GDSL-like Lipase/Acylhydrolase 140 295 IPR001087 GO:0016788
Trre10g04362 305 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Trre10g04362 305 SUPERFAMILY SGNH hydrolase 31 300 - -
Trre10g04362 305 Gene3D SGNH hydrolase 133 302 IPR036514 -
Trre10g04362 305 CDD SGNH_plant_lipase_like 29 299 IPR035669 -
Trre10g04362 305 PANTHER GDSL ESTERASE/LIPASE EXL3 14 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04362 Trre-Chr10 52929526 52933641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04362 10 297 Pollen Coat Proteome AT1G75910 32.647 1.32e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04362 - - gmx:100805486 483.796