Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04356 ATGGGTTTCACTGTTGGGCTGGTAAGAAATGTCTTCTCAAGAAATCATGCTATTAGGTCTCATGAAAGAAAAATAATGAGACGAAATTCTTCGGAAAATAGAAGATGGATATCTGTTAAATCATATTTATGTGGCAATGAATTCAATTCAGTTCTTGCTGAGGAAGATTCAGCTTCAATTAAGAGCTCTGAAGTTACAGTTACACAATCCATACAAGAAGATTTGTTGAGTGATAAAGGTGAAACCAAGAGTGAAGAAACTGTTGAGAATGTAATAGAGAAAAGTACTAATTCAAATTCCAAATCATTGAATGAAGAAGAAGCAGCTATTATTATTCAATCAGCATATAGAAGTTTCAAGTTGAGGTGTAAAAATGAAGAAATCATAAGGTCAGAAAATGATGAAGAGAAGCTGAATTTGGTAACAGAAAGTCCAGATAGAAAATCTATGGCCACATCAGTTGAAGTCCAAACAGGAAATTCAATTGAAATTTTCTCACTTGAAGGAGAAAAAATGAGCATTTACAACAGAATTCAGAACAGGAACAGAACAAGAGCAATAAAGCAAAAGGAAGATTGGGATGATAGCACTGTGAGTAGCAATGTTTCAAAAATGAGGATGCAGAATAGAATGGAGGCATCAACAAGGAGAGAAAGAGCATTGGCTTATGCCTTCTCACAACAGTTAAGAATATGTTCAAAGAGAAAATTAGCAAAACATGAGAACAACATGGAACAAAATATGAGCTGGAGTTGGCTTGAAAGATGGATGGCAACTAGACTTCAAGACACTTCATCAGTTGAAAGTCATGCTATGAATCAGTATGAAAATTTCAACACTGATGATCATCACAAATTCACTGTAAAGACAAGATTTTTAGATGCTTCTGGTGGTGAAGAAAAGGAAAGTTGTGGATCAAATGAAGTGCCACTTCATTTTGATAATTATTCAATAAATTCACAAGATGAAAAAGTTAGCAGCTTCAAATTGCCAACAACTAAAAAGACTAATTTTAAAGCTAGGAGAACTGTGTCTAGAAGGAAAACTGTGCCAAGTTATCAATTTCATGATGAACATCCAAAGGTGACCATTAAAGATGGCTCAAGCAATGCTATTAAGGATATTAAGCAAAAACCAAAGCAAGATGGAAGCAAGACAGAAATAAGTCAAATTACAATTAGCACCCCCAAAACTTCTAATGAGTGA 1206 0.3433 MGFTVGLVRNVFSRNHAIRSHERKIMRRNSSENRRWISVKSYLCGNEFNSVLAEEDSASIKSSEVTVTQSIQEDLLSDKGETKSEETVENVIEKSTNSNSKSLNEEEAAIIIQSAYRSFKLRCKNEEIIRSENDEEKLNLVTESPDRKSMATSVEVQTGNSIEIFSLEGEKMSIYNRIQNRNRTRAIKQKEDWDDSTVSSNVSKMRMQNRMEASTRRERALAYAFSQQLRICSKRKLAKHENNMEQNMSWSWLERWMATRLQDTSSVESHAMNQYENFNTDDHHKFTVKTRFLDASGGEEKESCGSNEVPLHFDNYSINSQDEKVSSFKLPTTKKTNFKARRTVSRRKTVPSYQFHDEHPKVTIKDGSSNAIKDIKQKPKQDGSKTEISQITISTPKTSNE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04356 401 MobiDBLite consensus disorder prediction 384 401 - -
Trre10g04356 401 PANTHER IQ-DOMAIN 5-RELATED 176 352 - -
Trre10g04356 401 Pfam IQ calmodulin-binding motif 107 124 IPR000048 GO:0005515
Trre10g04356 401 ProSiteProfiles IQ motif profile. 105 134 IPR000048 GO:0005515
Trre10g04356 401 MobiDBLite consensus disorder prediction 340 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04356 Trre-Chr10 52905673 52909675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04356 1 362 IQD Protein Family AT5G35670 38.942 1.44e-77 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04356 - - tpra:123924719 764.607