Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04324 ATGGTTTCTAGGGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTGTTACTAACTCTCATGCTCTAAACGATACCTCGATCGTGATCGATGCGTCAAAGTATATCGAAAATCTAAAGGAAAAGGTTGAAAGATTGAATGAAGAAATAGCATCTGCAGAAAGTTCAAGTGTTCATAACCCCTTGCCTATGGTTACGGTGGAAACCCTAGAAAAAGGATTTCTTATAAACGTTTTTTCAGCAAAAAGTAGCCAAGGTATGCTTGTTTCAATACTTGAAGCCATTGAAGAGATGAGACTTACGGTGCTTGAAGCTAGGGTTTCTTGTACAGACACTTTTCGATTCCAAGCTGTTGGAGGAGAGAATGAAGAACAAGGTGAGACTATTGATGCACAAGCTGTGAAACAAGCAGTGGGACAAGCAATAAAAAGTTGGAGTGAAAGTACCGATCAAGTGTAA 471 0.4034 MVSREQKRAALHEKLQLLRSVTNSHALNDTSIVIDASKYIENLKEKVERLNEEIASAESSSVHNPLPMVTVETLEKGFLINVFSAKSSQGMLVSILEAIEEMRLTVLEARVSCTDTFRFQAVGGENEEQGETIDAQAVKQAVGQAIKSWSESTDQV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04324 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
Trre10g04324 156 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04324 Trre-Chr10 52640199 52642984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04324 11 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 27.778 7.44e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04324 - - tpra:123919440 294.278