Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04323 ATGTCGCCGGTGACCGGAGCAAACATACCTCTCTTATCAGGATCAAAGGTATCTTCCGAACCGGCAGCAACAGTTTCCGGTGCGGTGTTTAATGTCGCGACGAGTATAATTGGCGCCGGAATTATGTCACTTCCGGCGACTTTGAAGGTTCTCGGAGTGATTCCGGCGTTTGTTTTGATTTTGGTGATTGCTTTATTGGCGGAAATATCGGTGGAGTATTTGATGAGGTTTACACATTCAGGTGAAACGACGACGTATGCTGGTGTTATGAGAGAAGCTTTTGGACCTTTAGGAGCTGTTGCAACTCAACTTTGTGTTGTGATTACTAATCTTGGGTGTTTAATTATGTACTTAATTATTATTGCGGATGTACTTTCTGGAAATAAACCTGAAGGAGAAGTACATTTGGGTCTTTTGCAACAATGGTTTGGAATTCATTGGTGGAATTCAAGGGAATTTGCTTTGCTCATCACTTTAATCTTCATTTTACTTCCATTGGTATTGTACCGTCGTGTAGAGTCATTGAAGTTTAGTTCTGCAGTATCAACTCTACTTGCTATTGCATTTGTTACAATATGTTCTGTGTTAGCAATCGTTGCTCTTGTGGAAGGAAAAACACAAACACCTAGATTGATTCCTCGTTTGGACCATGAAACTACTTTCTTTGATCTTTTCACTGCTGTTCCTGTTATTGTCACAGCCTACACATTTCATTTTAATGTACATCCAATTGGATTTGAGCTAGGAAAACCATCAGACATGACAACAGCAGTGAGAATAGCACTAATCCTATGTGCAATCATATACTTCTCAATAGGTCTATTTGGTTACTTATTATTTGGTGATTCAACTCAATCAGACATTCTAATAAATTTTGATCACAATGCTGATTCATCATTTGGTTCATTACTCAATACTTTGGTCCGTTTAAGCTATGCTTTTCATGTCATGCTAGCATTTCCTCTCCTAAATTTCTCATTGAGAACAAACATTGATGAATTCTTATTCCCTAAAAGACCCTTGTTAGCTACAGATAATAAGAGATTTGTGGTTATTACTTTGGTGCTTTTGGTTTTTAGTTACATTGCTGCCGTTGCAATTCCAGATATTTGGTTCATTTTTCAGTTTATGGGATCAACTTCTGCTGTTTGTCTTGCTTTTGTGTTCCCTGGTTCTATTGTTTTAAGGGATATTCATGGTATATCAACAAGAAAGGACAAAATTGTAGCACTGGTTATGGTTATATTGGCTGTAGTAACAAGTGTGATTGCTGTCTCCAACAACATATATAAGCTTTTTTAG 1302 0.3763 MSPVTGANIPLLSGSKVSSEPAATVSGAVFNVATSIIGAGIMSLPATLKVLGVIPAFVLILVIALLAEISVEYLMRFTHSGETTTYAGVMREAFGPLGAVATQLCVVITNLGCLIMYLIIIADVLSGNKPEGEVHLGLLQQWFGIHWWNSREFALLITLIFILLPLVLYRRVESLKFSSAVSTLLAIAFVTICSVLAIVALVEGKTQTPRLIPRLDHETTFFDLFTAVPVIVTAYTFHFNVHPIGFELGKPSDMTTAVRIALILCAIIYFSIGLFGYLLFGDSTQSDILINFDHNADSSFGSLLNTLVRLSYAFHVMLAFPLLNFSLRTNIDEFLFPKRPLLATDNKRFVVITLVLLVFSYIAAVAIPDIWFIFQFMGSTSAVCLAFVFPGSIVLRDIHGISTRKDKIVALVMVILAVVTSVIAVSNNIYKLF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04323 433 PANTHER AMINO ACID TRANSPORTER 17 420 - -
Trre10g04323 433 Pfam Transmembrane amino acid transporter protein 24 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04323 Trre-Chr10 52599421 52602548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04323 18 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.723 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04323 - - tpra:123881388 783.867