Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04322 ATGTCTAATTCAATTTCCACTACCTCCGAAACTATTACCCCTCTTCTTCAACAAAACCATTCACAAGACCCAATTCCACAAAATGGAACAATTTCAGGGGCAGTATTCAACATATCAACAACCATGGTGGGTGCTGGAATCATGTCGATTCCGGCAACGATGAAAGTTCTTGGAATAATTCCAGGTTTAATTGTGATCGTGTTGGTGGCAGTTATAACAGATTTAACTGTTGAGTTTATGTTGAGGTTTACAAGTTCTGGTAAAGCGGTTACTTATGCGGGTATGGTGGGTGAATCTTTTGGTTCTGTTGGATCTCTTGCTGTTAAGATTTGTGTTATTACCACTAATCTTGGTGTTCTTATCGTTTATTTCATTATTCTTGGTGATGTCCTCTGTGGAAATGAGTTCAATGGTAGCACACATTTAGGTATTCTACAACAATGGTTTGGCATCCACTGGTGGACTTGTCGCGCTTTTTCTCTTCTTATAGTTGCACTCTTCATTATGCTTCCTCTAGTTATGTTACGCCGTGTAGATTCACTCAAGTATAGTTCTGCATTATCAATCGCGCTAGCACTGGTTTTTGTTGTAATATGTTCCTCAATGGCATTTAACACATTATGGTCCGGAAAAACACAGTCAGTGAGAATATTTCCTGATTTCTCTCAAGTCACTGCCCTTGATCTTTTCACCACTGTCCCTATTTTTGTCACAGGCTTCGGATTTCATGTTAATGTTCATCCGATTAGAGCAGAGCTTGTAAAACCATCAGACATGAGTATCGCCGTGCGAATTTCGTTATTAATCTCCGTTGCCATTTACTTTGCTATCGGATTCTTTGGATACCTATTATTCGGGGACTCAATCATGCCAGATGTGTTGATAAACTTTGACCAGAACTCCGATTCGAGTGTTGGTCGATTGCTAGATGACATTATTCGGCTAAGCTATGCTCTCCATCTCGCACTTGTGTTCCCTATCATGTTCTATTCGTTGAGGGCTAACATCGATGAATTATTATTCTCAAATAAAAATAAGCCTCCTTTGGCTTTGGACACCACAAGATTTGTGTCACTCACTCTTGTTTTGCTAGCATTCACATATTTGGCGGCTGTGGAAATTCCAAATGTTTGGTACTTTTTTCAATTCTTGGGATCTACCACCATTGTTTGCCTCTCATTCCTTTTCCCTGCTGCAATCATTCTAAGGGATATGCATGGTATATCAAAAACAATAGATCAAGTAATGGCAATAGTGGTGATTATTTTGGCTGTTGGGACAAGTGGAATTGCAATATGGACCAACTTAAATGGTTCTAGTGCTAATTAA 1329 0.3935 MSNSISTTSETITPLLQQNHSQDPIPQNGTISGAVFNISTTMVGAGIMSIPATMKVLGIIPGLIVIVLVAVITDLTVEFMLRFTSSGKAVTYAGMVGESFGSVGSLAVKICVITTNLGVLIVYFIILGDVLCGNEFNGSTHLGILQQWFGIHWWTCRAFSLLIVALFIMLPLVMLRRVDSLKYSSALSIALALVFVVICSSMAFNTLWSGKTQSVRIFPDFSQVTALDLFTTVPIFVTGFGFHVNVHPIRAELVKPSDMSIAVRISLLISVAIYFAIGFFGYLLFGDSIMPDVLINFDQNSDSSVGRLLDDIIRLSYALHLALVFPIMFYSLRANIDELLFSNKNKPPLALDTTRFVSLTLVLLAFTYLAAVEIPNVWYFFQFLGSTTIVCLSFLFPAAIILRDMHGISKTIDQVMAIVVIILAVGTSGIAIWTNLNGSSAN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04322 442 PANTHER AMINO ACID TRANSPORTER 20 425 - -
Trre10g04322 442 Pfam Transmembrane amino acid transporter protein 29 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04322 Trre-Chr10 52594055 52597162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04322 8 442 Amino Acid or Auxin Permease AAAP Family AT3G56200 49.771 3.96e-148 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04322 - - gmx:100794031 667.922