Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04304 ATGGACACTTTTACTACAGAGAAGAACAACAACACTCATCAAATTTTGCAACTTGGGATGAGAAATGCAGCAGAAAGACACAATTTTTACACCAACCCACTTCATTTTTTCAGGTTATTTTTCATTTGCATCTTCTGGGTCAATTTTTTATGGCTTCCTATGAAACCAGTTTTGTGTGAAGAGCGTTGGGATGGAGTTGTTGTAACACAGTCAAATTTCTTAGCACTTCAAGCATTCAAAGAAGAGTTAATTGATCCAAAAGGGTACTTGAAAACATGGAATGATAGTGGCTTTGGAGCTTGTTCTGGTGCTTGGGCTGGAATCAAATGTGCTCATGGACAAGTTATTGTAATTCAACTTCCATGGAAAGGATTAAAGGGTAAAATCACTGATAGGATTGGTCAACTTGAAGGTCTTAGAAAACTTAGTCTTCATAATAATCAAATTAGTGGTTCAATCCCTTCATCATTAGGACTTCTAATCAATCTTAGAGGAGTTCAACTATTTAATAATAGGTTAACAGGTTCAATCCCTCCTTCATTAGGTTATTGTCCTATGCTTCAATCTTTAGATTTTAGTAACAATTTGCTCACAGGTACAATCCCTGAGAGCCTTGGAAATGCCACTAAGCTTTATTGGCTTAACATAAGTTTCAATTCATTGTCTGGTTCAATACCAACTAGTCTAACTAGCTTGAATTCTCTCACTTTCATATCTCTTCAACACAATAATCTTTCAGGTTCTATTCCTAACTCATGGGGTAGTAACTTGAAAAATGGATTCTCTAGGCTTCAAAATCTTGTATTGGATCATAATTTCTTGACTGGAACAATTCCTGCTTCTTTAGGTAACTTAAGGGAACTTAGAGAGGTTTCTCTTAGTCATAACCAGTTTAGTGGTCACATTCCTCAAAGTATTTGCAACATTTCAAATCTTAAACAGCTTGATTTGTCATTGAATAATCTCAGTGGAGAAATTCCCATTTCTTTTGATAATCTTCAGAGTCTTAATTTCTTCAATGTTTCTCATAATAACCTCTCTGGTCCTGTTCCAACTTTACTAGCACGGAAATTTAACTTGAGCTCGTTTGTTGGAAATATTCAACTATGTGGTTATAGTCCTTCGACTCGATGTCCCTCTTTAGCTCCTTCTGAAGTACCTGCAGCACCTTCGGAAGCACCTAAACACCACCATCACAAGAAACTAGGTACAAAAGACATAATCCTCATAGTAGCAGGAGTGCTCCTTGTAGTCCTGATAATAGTCTGCTGCATCCTGCTCTTCTGTCTATTCCGAAAAAGAAAAACATCGAATGCCGAGGGTGGACAGGCTACAGCGAGAGCAGCTGCTGCTGGCAGGACAGGAAAAGGAGTCCCTCCTATCGGTGGAGAAGTTGAACCGGGCGGTGACGCTGGAGGCAAACTGGTTCATTTTGATGGACCATTGGCTTTTACAGCTGACGATCTCCTGTGTGCAACGGCCGAGATAATGGGAAAGAGCACATATGGAACAGTGTATAAGGCAACATTAGAGGATGGTAGTCAAGCTGCAGTGAAACGATTGAGGGAAAAAATCACCAAGAGTCAGAGAGATTTTGAATCTGAAGTTAGTATTCTAGGGAGAATTAGACATCCAAATCTTTTGGCATTGAGAGCCTATTACTTGGGACCTAAAGGAGAAAAGCTTCTGGTTTTCGATTACATGCCTAAAGGAAGTCTTGCTTCTTTCCTACACGCTCATGGACCTGAAATACGAATTGATTGGCCAATACGGATGAACATAGCACAGGGTATGGCTCGTGGCTTGTTATACCTACATTCACATGAGAACATTATACATGGGAACCTAACTTCAAGCAATGTATTGCTTGATGAGAACACAAATGCAAAAATAGCAGATTTTGGTCTATCAAGGTTGATGACAACTGCTGCTAACTCTAATGTGATTGCTACTGCCGGAGCATTAGGATACCGAGCTCCCGAGCTATCGAAGCTAAAGAAAGCAAACACAAAAACTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTCCTAACAAGGAAGCCACCTGGTGAGGCAATGAATGGTGTTGATTTACCTCAGTGGGTTGCCTCAATTGTTAAAGAGGAGTGGACAAATGAGGTTTTCGATGTCGATTTGATGAGAGATCCATCAACAAATGGTGATGAATTGTTGAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGGCCAGAAGTTCAGCTGATACTTCAGCAGCTAGAAGAGATTAGACCACAGATATCATCAGCCATTTCTAGTGATGAAGGAGCTATCCCTTCTGCAAGTGAATAA 2349 0.3985 MDTFTTEKNNNTHQILQLGMRNAAERHNFYTNPLHFFRLFFICIFWVNFLWLPMKPVLCEERWDGVVVTQSNFLALQAFKEELIDPKGYLKTWNDSGFGACSGAWAGIKCAHGQVIVIQLPWKGLKGKITDRIGQLEGLRKLSLHNNQISGSIPSSLGLLINLRGVQLFNNRLTGSIPPSLGYCPMLQSLDFSNNLLTGTIPESLGNATKLYWLNISFNSLSGSIPTSLTSLNSLTFISLQHNNLSGSIPNSWGSNLKNGFSRLQNLVLDHNFLTGTIPASLGNLRELREVSLSHNQFSGHIPQSICNISNLKQLDLSLNNLSGEIPISFDNLQSLNFFNVSHNNLSGPVPTLLARKFNLSSFVGNIQLCGYSPSTRCPSLAPSEVPAAPSEAPKHHHHKKLGTKDIILIVAGVLLVVLIIVCCILLFCLFRKRKTSNAEGGQATARAAAAGRTGKGVPPIGGEVEPGGDAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKSQRDFESEVSILGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHAHGPEIRIDWPIRMNIAQGMARGLLYLHSHENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTRKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVDLMRDPSTNGDELLNTLKLALHCVDPSPSARPEVQLILQQLEEIRPQISSAISSDEGAIPSASE 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04304 782 Gene3D Ribonuclease Inhibitor 72 182 IPR032675 -
Trre10g04304 782 Gene3D Ribonuclease Inhibitor 183 257 IPR032675 -
Trre10g04304 782 SUPERFAMILY Protein kinase-like (PK-like) 495 764 IPR011009 -
Trre10g04304 782 Gene3D Transferase(Phosphotransferase) domain 1 569 776 - -
Trre10g04304 782 FunFam Leucine-rich repeat receptor protein kinase EMS1 180 257 - -
Trre10g04304 782 ProSiteProfiles Leucine-rich repeat profile. 138 160 IPR001611 GO:0005515
Trre10g04304 782 FunFam Leucine-rich repeat receptor-like protein kinase 476 567 - -
Trre10g04304 782 Pfam Leucine rich repeat N-terminal domain 74 110 IPR013210 -
Trre10g04304 782 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 258 378 - -
Trre10g04304 782 Pfam Protein tyrosine and serine/threonine kinase 494 759 IPR001245 GO:0004672|GO:0006468
Trre10g04304 782 FunFam Leucine-rich repeat receptor-like kinase 71 179 - -
Trre10g04304 782 Pfam Leucine rich repeat 262 322 IPR001611 GO:0005515
Trre10g04304 782 Pfam Leucine rich repeat 187 245 IPR001611 GO:0005515
Trre10g04304 782 FunFam Os07g0541700 protein 568 654 - -
Trre10g04304 782 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 197 762 - -
Trre10g04304 782 CDD STKc_IRAK 497 762 - -
Trre10g04304 782 SUPERFAMILY L domain-like 71 361 - -
Trre10g04304 782 Gene3D Phosphorylase Kinase; domain 1 497 568 - -
Trre10g04304 782 ProSiteProfiles Protein kinase domain profile. 491 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g04304 782 Gene3D Ribonuclease Inhibitor 258 380 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04304 Trre-Chr10 52437320 52439868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04304 63 764 Receptor kinase-like Gene Family AT3G51740 57.677 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre10g04304 PK_Tyr_Ser-Thr 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04304 - - gmx:100811174 1034.25