Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04280 ATGGCTTCCAAAACAACCTATTCATTCTTCTTCCTCTCTCTTCTAGCATTCCTTTCAATACCAAATTCCGCCATTGCCTCTAATAAAATCACCGCAATCTTTGCCTTCGGTGACTCCACCATCGATGCGGGCAACAACAACCACTTAAACAGCCTCTTCCGCGGTGACCATTTGCCCTACGGCTGCGATTTTCCAAACCACATCCCAACCGGTAGATTCTCAAATGGAAAAATATCGACCGATTATCTTAGCCAATTTCTAGGCATTAAGGATTTATTACCTGCTTTTCTTGACCCACAAGTTACCGATAATGATTTATTAACTGGGGTTAGTTTCGGCTCTGGTGGCTCGGGTTTGGATAGCCATACAGTGGCCTTAGCTAAGGTCTTGGATTTGGGTTCGCAATTTAAGTTGTTTGAGCAAGCTTTGTTAAGGATCAGAAGAATTGTTGGTAATGAAAAGGCTAATGATATAATTCATAATGCATTGTTTGTGATTAGTATTGGGACTAATGATATGTTGGAAAATGTTTATATGGTGCCAACAAGTACTGTTACTCCCTATGGTTCTATTTCATCTTATCAAGATTTTTTGCTCCAAAATCTTCAGAATTTTTTTCAGAGATTGTATGGAGCTGGAGGTCGTAGGATTATGGTGGCAGGTCTTCCTCCAATTGGTTGTCTTCCAATACAAGTAACATTAGATAGCATCTTACCTAGCCAAAATTGGCTCCAACGTGTTTGCAACGTCCAACAGAACATTGATTCTCAAAATTACAACGCTAAACTTCAATCCAATGTTCATTTATTGCAAGCCACACTCCAAGATGCTAAGATTGCTTATTTCGATATCTATACACCTATTCTTGATATGGTCCTATACCCAGCCAAATACGGTTTCGGGCATTCACTTCTAGGATGCTGTGGAACAGGGGTGTTGGAGATGGGTCCTGTGTGCAATACAGATGACATAATCTGCCCTGATCCATCTAAGTATCTGTTTTGGGATGCTGTTCACCCGACACAAGAAGAGTACTCAGTTATTGCCAAAAATGGTCAAACTCTGCTCCCATACCTTACTAGTTAA 1086 0.4061 MASKTTYSFFFLSLLAFLSIPNSAIASNKITAIFAFGDSTIDAGNNNHLNSLFRGDHLPYGCDFPNHIPTGRFSNGKISTDYLSQFLGIKDLLPAFLDPQVTDNDLLTGVSFGSGGSGLDSHTVALAKVLDLGSQFKLFEQALLRIRRIVGNEKANDIIHNALFVISIGTNDMLENVYMVPTSTVTPYGSISSYQDFLLQNLQNFFQRLYGAGGRRIMVAGLPPIGCLPIQVTLDSILPSQNWLQRVCNVQQNIDSQNYNAKLQSNVHLLQATLQDAKIAYFDIYTPILDMVLYPAKYGFGHSLLGCCGTGVLEMGPVCNTDDIICPDPSKYLFWDAVHPTQEEYSVIAKNGQTLLPYLTS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04280 361 Coils Coil 260 280 - -
Trre10g04280 361 Pfam GDSL-like Lipase/Acylhydrolase 33 350 IPR001087 GO:0016788
Trre10g04280 361 CDD SGNH_plant_lipase_like 31 351 IPR035669 -
Trre10g04280 361 SUPERFAMILY SGNH hydrolase 111 351 - -
Trre10g04280 361 Gene3D SGNH hydrolase 21 357 IPR036514 -
Trre10g04280 361 PANTHER GDSL ESTERASE/LIPASE EXL3 15 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04280 Trre-Chr10 52252691 52254934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04280 10 350 Pollen Coat Proteome AT1G75930 35.735 1.80e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04280 - - aprc:113874497 499.204