Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04244 ATGAATGAAGGGAAACTTTTTGAATGTAGTTATCCCGGTTCAATATCGAACCTTTTGGGAAAACATTCTTTGCTTCTTATGAAAGGTTCTCTTCATAAGAGAATGCATTCACTTACTATGAGTTTTGCTAATTCTTCTATTATTAAAGATCATCTTCTTGTTGATATTGATCGGCTTATTCGGCTTAATTTGGATTCTTGGTCCGACCGGGTTTTGCTCATGGAGGAGGCCAAGAAGATAACGTTTGAGTTGACAGTGAAGCAATTGATGAGTTTTGATCCAGGTGAATGGACTGAGACTTTGAGGAAAGAGTACGTTCTCGTGATTGAAGGATTTTTCACACTTCCCTTACCATTACTCTCTAGTACCTATCGTAGAGCTATCAAGGCAAGGACGAAGGTGGCAGAGGCATTAACATTGATTGTGAGGCAGAGAAGAAAAGAAAGTGTAATGGGGGAGACAAAGAATGACATGCTAGGGGCATTGTTGGCTTCCGGCGACCAATTTTCTGACGAGCAAATAGTCGATTTTATGTTGGCATTGCTCGTCGCTGGCTATGAAACCACCTCTACCATAATGACTCTTGCGGTCAAGTTTCTCACCGAGAATCCTTTAGCATTGGCACAACTCAAGGAAGAGCATGATCAAATAAGAGCAAAGAAGAGTTGCCAAGAGGAACCATTGGAGTGGACAGATTACAAGTCAATGGCATTTACTCAATGTGTTGTGAATGAAACTTTAAGGATGGCAAATATAATAGGTGGGATATTTAGGAGAGCAATGACAGACATCAATATCAAAGGCTACACTATTCCAAAGGGGTGGAAGGTCTTTGCATCATTTCGTGCCGTACATCTAAACCCCGATCATTTCAAAGACGCTCGTACCTTCAATCCATGGAGATGGCAGAGAAAATCAGAAGCAACAAGCCCAGGAAATATATACACACCGTTTGGAGGAGGGCCGCGGCTGTGCCCCGGCTATGAGCTAGCCAGAGTTGTGCTCTCGGTATTTCTTCACCGTTTTGTCACTCGTTACAGTTGGTCTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCGACCACTCGGACGCAGAAGAGGTATCCTATTATAGTGAAGCGTAGAGTGCAATCGAATTCGTTCATGTAA 1149 0.4265 MNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWSDRVLLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLLSSTYRRAIKARTKVAEALTLIVRQRRKESVMGETKNDMLGALLASGDQFSDEQIVDFMLALLVAGYETTSTIMTLAVKFLTENPLALAQLKEEHDQIRAKKSCQEEPLEWTDYKSMAFTQCVVNETLRMANIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQRKSEATSPGNIYTPFGGGPRLCPGYELARVVLSVFLHRFVTRYSWSPAEEDKLVFFPTTRTQKRYPIIVKRRVQSNSFM 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04244 382 PRINTS E-class P450 group I signature 173 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS E-class P450 group I signature 315 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS E-class P450 group I signature 280 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS E-class P450 group I signature 325 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS E-class P450 group I signature 193 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS E-class P450 group I signature 240 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 318 327 IPR017972 GO:0005506|GO:0016705
Trre10g04244 382 Gene3D Cytochrome P450 1 375 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS P450 superfamily signature 241 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS P450 superfamily signature 316 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 PRINTS P450 superfamily signature 184 201 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 Pfam Cytochrome P450 114 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g04244 382 CDD CYP90-like 2 374 - -
Trre10g04244 382 PANTHER CYTOCHROME P450 26 2 357 - -
Trre10g04244 382 SUPERFAMILY Cytochrome P450 5 375 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04244 Trre-Chr10 51903773 51911867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04244 27 375 Cytochrome P450 AT5G05690 80.571 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04244 K09588 - gmx:100775886 708.753