Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04218 ATGCCTTCTTCATCTCCAACCTTGTTCTCAAAATGTACTATAATCCCTGACCAAAAATCCACTATTGGAAACCTTAAACTCTCTGTTTCAGATCTTCCTATGCTTTCTTGTCACTACATCCAAAAAGGTTGTCTCTTCACAAAACCATCAATTCCCTTTCATAATCTAATCCCTATCATCAAAACTGCTCTCTCTCGAACTCTCTCAATCTTTCCACCTCTCGCCGGTCGTTTAACCACCGATTCCGATGGTTACGTTTACATAACCTGCAACGATGCTGGAGTCGATTTCATCACTGCCAATGCCACTGAACTCTACATCCATGATCTATTATCAACCATAGATGTCAACGAGTCTTTCAAAGAATTTTTTACTTTTGATCGGAAAGTCAGTTACAGCGGCCATTATTCTCCAATAATGGCCGTTCAGGTAACTGAACTTTCCGATGGTATTTTTATCGGCTGTGCCGTTAATCATGCCGTCACTGACGGTACTTCCTTCTGGAATTTCTTCAATACATTTGCACAATTATGCAGAGGAGCAAACAAATGTATCAGAAATTCTCCAAGCTTCCGTCGCGACTCTGTTTTAATCTCAAACGCCGTTCTCCGGTTACCGGAGGGAGGTCCTGTGGTGACATTCAACGCCGACGCACCGATAAGAGAAAGAATCTTTAGCTTCAGCAGAGAAGCAATTCAGAAACTCAAAGCCAGAGCTAATAACCGTCGCTGGTCGGAAAATAACAACGCCGTCGAATTGATGCAGAAACACATGAACGATCACTATAACAATAACAACAATAATCAGAAAGAAAACGGTAACGGTAAGGTAGCGGCGTTAATTGAGAATTGGTTTAAGAGCAATGTTAATTCAAAACAACAAACGGTTACCGTAACAGAAACAGAAACAGAAACGGTTGAGATTTCATCTTTTCAATCTCTATGCGCGTTACTATGGCGTGCAGTCACGCGCGCGAGGAAATTTCATCCATCCAAAACAACAACATTTAGAATGGCGGTTAATTGTAGACACCGTGTTAAACCGGAGCTAGAATCATTTTATTTCGGAAACGCTATTCAGAGCGTTCCGACATACGCATCAGCCGGAGATGTAATGTCTAAAGATATCCGGTGGTGTGCGGAGCAGCTGAATAAAAACGTGAAGGCACACGATAATCTTATGGTGAGGAAGTTTGTAGAGGATTGGGAGAAGAATCCAAGGTGTTTTCCTTTGGGGAACCCTGATGGTGGTTCTATAACAATGGGTAGTTCTCCGAGGTTTCCGATGTACGATAATGATTTTGGTTGGGGAAAACCGTTAGCGGTTAGGAGTGGGAAAGCGAATAAATTTGACGGTAAGATTTCGGCGTTTCCAGGGAGAGATGGAAGTGGGACCGTTGATTTAGAGGTTGTTTTGGCGCCAGAAACTATGGCGGGGCTTGAGAATGATGCTGAGTTTATGGTTTATGCATCTAGGCAGTTATGA 1485 0.4263 MPSSSPTLFSKCTIIPDQKSTIGNLKLSVSDLPMLSCHYIQKGCLFTKPSIPFHNLIPIIKTALSRTLSIFPPLAGRLTTDSDGYVYITCNDAGVDFITANATELYIHDLLSTIDVNESFKEFFTFDRKVSYSGHYSPIMAVQVTELSDGIFIGCAVNHAVTDGTSFWNFFNTFAQLCRGANKCIRNSPSFRRDSVLISNAVLRLPEGGPVVTFNADAPIRERIFSFSREAIQKLKARANNRRWSENNNAVELMQKHMNDHYNNNNNNQKENGNGKVAALIENWFKSNVNSKQQTVTVTETETETVEISSFQSLCALLWRAVTRARKFHPSKTTTFRMAVNCRHRVKPELESFYFGNAIQSVPTYASAGDVMSKDIRWCAEQLNKNVKAHDNLMVRKFVEDWEKNPRCFPLGNPDGGSITMGSSPRFPMYDNDFGWGKPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLENDAEFMVYASRQL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04218 494 Gene3D - 7 204 IPR023213 -
Trre10g04218 494 Pfam Transferase family 7 487 - -
Trre10g04218 494 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 487 - -
Trre10g04218 494 Gene3D - 219 486 IPR023213 -
Trre10g04218 494 SUPERFAMILY CoA-dependent acyltransferases 57 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04218 Trre-Chr10 51651088 51652572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04218 59 482 Monolignol Biosynthesis Gene Families AT5G48930 26.077 7.65e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04218 - - gmx:100500612 778.089