Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04217 ATGTCTGACGCTTTGATCAATGGATTGGCTGGAGCTGGTGGAGGGATCATTGCTCAACTTATCACATACCCTCTTCAAACGGTAAACACTCGTCAACAAACCAATCGTGATCCGAAGGACAAGAAGAATCTTGGAACTTTCCACCAAATGTGTCAGGTTGTGAAACATGAGGGGTGGGAGCGATTGTATGGAGGCTTGACGCCATCACTTGTCGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACCGAGCTGAAGCAGCAGCATTAGAGAAGAAAATGCTAGGCACTGGTGATGGATCTATTGGAATGTTCTCCTCACTTATTGTTGCTGCTTTATCTGGTTGCGTTAACGTGCTCTTGACAAATCCCATATGGCTAGTTGTTACTCGCATGCAGACGCATAGAAAAGAGTCGAAAAGAACCCTCGCTGATCCACGGTTGTCAGACGCCATTAAACAAACAACAATTTCTACTGTTGAGCCTCGTTCTTATGGAACTAGCCATGTGATTCAAGAAGTTTACGATGAAGCTGGTGTTTTAGGTTTCTGGAAGGGCGTGTTACCAACATTAGTCATGGTTAGCAATCCTTCCATACAGTTCATGCTGTATGAAACCTTGTTGGCGAAGTTGAAAAAAGGACGTGCTGGTAATAGCGTAACTGCAATAGAGATATTTCTTCTTGGAGCTATTGCTAAGCTTGGAGCTACGGTTGTGACCTATCCTCTTCTTGTTGTCAAGGCAAGGCTTCAAGCTAGACAGGTTAAAAATGGAGACAAGAGACACCATTATAAAGGTACATGGGATGCTATTATTAAGATGATCCGCTATGAGGGTTTTAATGGATTTTACAAAGGCATGGGGACCAAAATTGTACAAAGTGTTCTAGCTGCAGCTGTTTTGTTTATGGTGAAAGAAGAACTAGTTAAGCAGACACGTTTCTTGCTTTCCAAGCCAAAGCTTGTATGA 987 0.4255 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTNRDPKDKKNLGTFHQMCQVVKHEGWERLYGGLTPSLVGTATSQGVYYYFYQIFRNRAEAAALEKKMLGTGDGSIGMFSSLIVAALSGCVNVLLTNPIWLVVTRMQTHRKESKRTLADPRLSDAIKQTTISTVEPRSYGTSHVIQEVYDEAGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKGRAGNSVTAIEIFLLGAIAKLGATVVTYPLLVVKARLQARQVKNGDKRHHYKGTWDAIIKMIRYEGFNGFYKGMGTKIVQSVLAAAVLFMVKEELVKQTRFLLSKPKLV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04217 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 317 IPR018108 -
Trre10g04217 328 Gene3D Mitochondrial carrier domain 6 320 IPR023395 -
Trre10g04217 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 216 IPR018108 -
Trre10g04217 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 90 IPR018108 -
Trre10g04217 328 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 319 IPR044712 GO:0006862|GO:0055085
Trre10g04217 328 Pfam Mitochondrial carrier protein 7 89 IPR018108 -
Trre10g04217 328 Pfam Mitochondrial carrier protein 226 314 IPR018108 -
Trre10g04217 328 Pfam Mitochondrial carrier protein 107 219 IPR018108 -
Trre10g04217 328 SUPERFAMILY Mitochondrial carrier 3 313 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04217 Trre-Chr10 51625325 51630689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04217 24 323 Chloroplast and Mitochondria Gene Families AT2G47490 29.412 1.64e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04217 K13354 - gmx:100775784 506.138