Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04176 ATGTTCTCTTTAAAGCCATTCCTTCGTTTTCTTCTCATCTGCATTCTCATTCATCAAGCATGTTCCAATAAAGATCGCAAGGCTTACATTGTTTACATGGGTAATCATCCTAAGGGAATGGACCCTGCCACTTCACCTTCACTTCACTCCAAAATGGCTCAAAATGTCCTTGGAAGTGATTATGAACCAGGAGTCATACTTCACAGCTACAAGAAGAGCTTTAACGGATTCGTCATGAAGTTGACAAAAGATGAAGCAGAAACAATAGCCGAAATGGACGATGTCGTATCTGTTTTCCCAAACACAAAGAATCATCTTCACACAACAAAATCATGGGACTTCATAGACCTCCCACAACAAGTCAATAGAATGAGTTTGGAGAGTGACATCATTGTTGGAGTATTAGACACCGGAATTTGGCCAGAATCTAAGAGCTTCACTGATGAAGGATTTGGTCCTCCACCAACAAAATGGAAGGGATCATGCCATAACTTCACCTGCAACAATAAAGTAATTGGGGCAAGATACTTCAATATTGAAGGTAATTATAGTGACAAGGATATCAAATCTCCAAGGGATGTAAATGGGCATGGATCACACTGTGCATCCACTGTTGCTGGAAACGCGGTTAACTCTGTAAGCCTACAAGGGTATGCCTCAGGGACAGCACGCGGAGGAGTTCCCTCAGCTCGCATTGCCGTGTACAAAGTATGTTGGGAAGAAGGATCTGGTTGCAGTGAGGCTGATATTCTTGCCGCATTTGATGCAGCAATAGCTGACGGTGTTGATGTTCTTTCTGTTTCTATTGGATCTAAGAAATTAATATATCATCAATATTTTCAAAGTGCAATAAACATTGGGAGTTTCCATGCAATGCAAAGTGGTGTATTTACTTCAAATTCTGCTAATAATTTGGGCCCTAATATTTTCACTATGACAAATTATCCACCTTGGTTACTTTCTGTGGCTGCTAGCACTTTTGGCAGAACATTTGTTACAAAAGTGAAATTGGGAAATGGTGCCATTTATGAGGGATCGACAATAAACACATTTGGTCTCAAAAACAAAATGTTTCCACTGATTTTTGCAGGAGATATACCTAATACTGCTGGTGGATATAACAGTTCTGTATCCAGGTTATGTTTGAAGGACTCTGTGGATAAAGATGCAGTGAAGGGAAAAATAGTTTTATGTGAGAGCAGGACTCAAGTGGGGTTTTTCTCTGGGGCAATTGGTGTAATATTTGGAGGTGTTGCTCCACAAGATTCACCAAAAACATTTGCATTGCCAGCAACGTTCCTTAGTCTAAGGAACGTAAGAGAAATACAAGATTACATTAAATCAACAAGAAATGCAACTGCCACAATATTTAAGAGTGAAGAAGTCGAAGATTTGATGTCACCTTATATAGCTTCGTTTTCATCAAGAGGTCCAAACCCAATTACACCAAATATTCTCAAGCCTGATATCGCTGCCCCGGGAGTTAATGTTATAGCTGCATGGACTCCACTAAACCCAATTTCAAATGTTGAAGGCGACAAAAGAAAAGTACAATATCAAATAATCTCAGGAACTTCAATGGCATGTCCTCATACCGCTGCGGCTGCTGCATACGTTAAATCATTTCACCCTACATGGTCTCCTGCTATAATCAAATCTGCATTGATGACCACCGCTACTACAATGAGCTCTACCATAAATCCTGAGGCTGAATTCGCATACGGCGCAGGGCAAATTAGTCCTGTTAACGCAACAAATCCGGGTTTAGTATATGATATCAGTGAAGCAGATTATATCAAGTTCTTATGCGGAGAAGGGTACACGACTAAACAACTTCAAATTCTTACTCATCAACAGGGTGATTGCAAGGAAAATGCTAATGAGAACGCTGTATACAACTTGAATCTACCGTCATTTGCGCTTAAAGTAAACAATACATTTATCGGTCATGCTTTTAATAGAACAGTTACAAATGTGGGATCTGCAAATTCTACTTATAAAGCAAGAGTAATGTCTTCATCTTTGTTGGAAATTCAAGTGAAACCTGAAGTTTTGTCTTTCACATCTATAGGGCAAAAAAAATCATTCTCTCTTACAATAGAAGGGAACATCAATGTGGGAATAATGTCTGCTTCTTTGATTTGGGATGATGGTAATTATCAAGTTAGAAGCCCAATTGTAGTGTATGAGGTGTAA 2196 0.3934 MFSLKPFLRFLLICILIHQACSNKDRKAYIVYMGNHPKGMDPATSPSLHSKMAQNVLGSDYEPGVILHSYKKSFNGFVMKLTKDEAETIAEMDDVVSVFPNTKNHLHTTKSWDFIDLPQQVNRMSLESDIIVGVLDTGIWPESKSFTDEGFGPPPTKWKGSCHNFTCNNKVIGARYFNIEGNYSDKDIKSPRDVNGHGSHCASTVAGNAVNSVSLQGYASGTARGGVPSARIAVYKVCWEEGSGCSEADILAAFDAAIADGVDVLSVSIGSKKLIYHQYFQSAINIGSFHAMQSGVFTSNSANNLGPNIFTMTNYPPWLLSVAASTFGRTFVTKVKLGNGAIYEGSTINTFGLKNKMFPLIFAGDIPNTAGGYNSSVSRLCLKDSVDKDAVKGKIVLCESRTQVGFFSGAIGVIFGGVAPQDSPKTFALPATFLSLRNVREIQDYIKSTRNATATIFKSEEVEDLMSPYIASFSSRGPNPITPNILKPDIAAPGVNVIAAWTPLNPISNVEGDKRKVQYQIISGTSMACPHTAAAAAYVKSFHPTWSPAIIKSALMTTATTMSSTINPEAEFAYGAGQISPVNATNPGLVYDISEADYIKFLCGEGYTTKQLQILTHQQGDCKENANENAVYNLNLPSFALKVNNTFIGHAFNRTVTNVGSANSTYKARVMSSSLLEIQVKPEVLSFTSIGQKKSFSLTIEGNINVGIMSASLIWDDGNYQVRSPIVVYEV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04176 731 SUPERFAMILY Subtilisin-like 106 589 IPR036852 GO:0004252|GO:0006508
Trre10g04176 731 Gene3D Peptidase S8/S53 domain 129 598 IPR036852 GO:0004252|GO:0006508
Trre10g04176 731 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Trre10g04176 731 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Trre10g04176 731 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Trre10g04176 731 CDD Peptidases_S8_3 105 555 IPR034197 -
Trre10g04176 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Trre10g04176 731 Gene3D - 602 731 - -
Trre10g04176 731 ProSiteProfiles Serine proteases, subtilase domain profile. 111 585 - -
Trre10g04176 731 FunFam Subtilisin-like protease SBT1.5 129 339 - -
Trre10g04176 731 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Trre10g04176 731 Gene3D - 328 463 - -
Trre10g04176 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 728 IPR045051 -
Trre10g04176 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
Trre10g04176 731 CDD PA_subtilisin_like 335 456 - -
Trre10g04176 731 Pfam Fibronectin type-III domain 633 728 IPR041469 -
Trre10g04176 731 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Trre10g04176 731 Pfam Subtilase family 128 577 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04176 Trre-Chr10 51219978 51224656 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04176 11 729 Subtilisin-like Serine Gene Family AT3G46850 45.306 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04176 - - gmx:100815516 1000.35