Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04142 ATGGACTTTAGAGTTTACCTTGGGAGTTTAATGCTCCTTATTAGCATTGCTTCAATAATTCTGCTGGTGAAAATTTACCACTCGCCTTCTAAGGATGATCACAAGGCTCCTAAAAATGACTCGTCTTCTAAACACGAGCTAAAGACATACATAATTTATACCGGACACAAATTTAAAGATGAAGCTACTTCAGTAGCGATATACCATCATCTACTAGAGCAAGTTATACCAAGAAATGCAAGAAGGCCAATACTTACTTACTATTGGCGAACATTCAGTGGTTTCGTGGCAGATCTAACCGAGGATGAAGCTGCGAAAATGGCAGGACTCGACGGGGTGGTGTCGGTATTTCCGGATAGAAAGTTGGAGCTCCTTTACACAAGGCCTTGA 390 0.4128 MDFRVYLGSLMLLISIASIILLVKIYHSPSKDDHKAPKNDSSSKHELKTYIIYTGHKFKDEATSVAIYHHLLEQVIPRNARRPILTYYWRTFSGFVADLTEDEAAKMAGLDGVVSVFPDRKLELLYTRP 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04142 129 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 124 IPR037045 -
Trre10g04142 129 Pfam Peptidase inhibitor I9 49 124 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04142 Trre-Chr10 50722070 50722960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04142 48 124 Subtilisin-like Serine Gene Family AT5G59130 38.750 2.35e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04142 - - gmx:100784447 95.1301