Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre10g04099 | ATGACAATTGGGTTCATGGAAGTGCTTCTGGTGAAAGCAAAGGGTCTTCAAGAAACTGATGTCTTTGCTCACATGGATCCGTATGTTGTGTTACAATACAAAAGTCAAGAGAAAAAGAGCAGTGTTGTTCATGAGGGGGGCAGGAGTCCTGTATGGAATGAGAAGTTTGTATTCAGAGTGGAATACCCTGGATCAGGTGACCAGTACAAGCTCAACCTTAAAATCATGGACAAGGATGTTTTTTCTAGAGATGATTTTGTTGGCCAAGCCATAATCTATGTAAAAGATTTATTGGTGGAAGGAGTAGAGAACGGATCAGCTGAGCTTCATCCTCGCAAGTATAGTGTGGTTCGAGCTGACAATTCTTATTGCGGTGAAATCGAAGTTGGTTTAACATTTACTCGAAAGGAAGATGAATATGCCGACGACGACTTTGGAGGATGGAAGGATAGTGAATATTAA | 462 | 0.4113 | MTIGFMEVLLVKAKGLQETDVFAHMDPYVVLQYKSQEKKSSVVHEGGRSPVWNEKFVFRVEYPGSGDQYKLNLKIMDKDVFSRDDFVGQAIIYVKDLLVEGVENGSAELHPRKYSVVRADNSYCGEIEVGLTFTRKEDEYADDDFGGWKDSEY | 153 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre10g04099 | 153 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 137 | IPR035892 | - | |
Trre10g04099 | 153 | Gene3D | C2 domain | 3 | 135 | IPR035892 | - | |
Trre10g04099 | 153 | PANTHER | C2 DOMAIN-CONTAINING | 3 | 138 | - | - | |
Trre10g04099 | 153 | SMART | C2_3c | 5 | 106 | IPR000008 | - | |
Trre10g04099 | 153 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
Trre10g04099 | 153 | Pfam | C2 domain | 7 | 105 | IPR000008 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre10g04099 | Trre-Chr10 | 50244696 | 50247045 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre10g04099 | 3 | 109 | C2H2 Transcription Factor Family | AT4G21160 | 31.776 | 2.03e-11 | 58.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre10g04099 | - | - | gmx:100500493 | 274.248 |