Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04091 ATGTCTTTTAACTTCAACAAGAAAACCCTAATGAAAACGCTTTTTTCATCTAACAAAAGTTGTGGTTGCATTAAATTGAAACCCTCGAATGTCCTTCAACCCTCTCAAAAACCAAAAATATCCATTTACCAAAATAAAAACCCTAAACGGATCATTTCCTCCACCACCACTTCCTGCGACGGCAATGCCGGCGATGAAGATTATACATCCACTACCATCTCGGACGACAACGACAAAAATAACTATAGTATTTTAAAACCGGGTACAAAACTCGTCGATAGCGTTGCCATTGAGAAGGAGTCGGACGAGCCATACGAAGATTTTCGAAACTCAATACATCAAATGATATTGGAGAGAAATATTTACTCTGAAAAAGATCTACAAGAACTTCTTGAATGTTTTCTTCAGCTTAATGCGAAGTGTCACCACCATGTCATTGTTGAAGCTTTCATGGAGATTTGTGAAAAAATATTCCCTAAGAAGGTTTGTGGTGACGGTAGAGAAGTGTGA 510 0.3804 MSFNFNKKTLMKTLFSSNKSCGCIKLKPSNVLQPSQKPKISIYQNKNPKRIISSTTTSCDGNAGDEDYTSTTISDDNDKNNYSILKPGTKLVDSVAIEKESDEPYEDFRNSIHQMILERNIYSEKDLQELLECFLQLNAKCHHHVIVEAFMEICEKIFPKKVCGDGREV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04091 169 NCBIfam uncharacterized plant-specific domain TIGR01568 95 156 IPR006458 -
Trre10g04091 169 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 62 158 IPR038933 GO:0045892
Trre10g04091 169 ProSiteProfiles OVATE domain profile. 97 156 IPR006458 -
Trre10g04091 169 Pfam Transcriptional repressor, ovate 101 158 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04091 Trre-Chr10 50186559 50187068 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre10g04091 Ovate 1.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04091 - - psat:127086665 221.861