Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04022 ATGTCTTCTAAACAAAATGATACAACTACTCAATTTAGAACATGCATATACCTACCTCCGCGGGTAAATTCACAAAATCCATGGTACGAAACGACCGTTACTCGTTCATTTTTAGGAAATTCTTTGACTGTGTTGCAGATGCAAATGTGTTTGATCTTTTTTGGAGCTCTTTTCTTCAAATCTATATTTTGTCGTTTTCGAATCCCCAGGTTCACTTCTATGAGCATTGTTGGTCTAATATTTGCAACTACATTCAATAAAAATTGGACTGGAAAAATGAAGATGTTGTTCTTCTTTGATTCACAAGAAAATCTAGGACTAATTTCAATATTTGGTTTCATGCTCTTCCTGTTCTACATTGGTGTCAAAACAGATATGAGTGTTGTCCACAAAACTAGAAGTGGTGCAACCAAATTAGGTTCTATTGCTATAATAGCTCCATATCTATGTAGCATGGCTGTTCTAAATTCATATTCATCAAAATACCTACAACCTGAGCAAGTAAGAATCCTTGGATCTATCATTGGATTTTTTTGTATTTCATCTTTTCCTGTCATTTTCTCAAATTTAAGTGATCTCAAGATTCTCAATACAGAATTGGGTCGAATCGGTCTATCAGCATCATTAGTTAGTGAGGTTTTCAATGTGTTTTTAGCATCAATAATAACATTTTCTATATTACATGGAGAGCGTCCAACGAATGGTTTGGTTTGCGTTGTGGCCGCTGCCTTGTATATATTCATGGTTATATTCATTATTCGACCCGCAATGTTTTGGATAATAAAACAAACACCGGAAGTCATTGTTGTAACAAAATTTGTGGCTTGTATGATAACTTCTTTATGCAATGGGATGCCATGGAACGATGTTGTTTGTTTATCTTTGATTATGAGTTCCAAAGGCATTGTTGAAATGGCTGCTTTCTCTTTGGTCAGAGATTTCAAAAAATACGCTGGTTACATAAAGAGAAACATAATAGATCTAAAAAGTAACTCAGAACTTCGAGTTTTAGCATGTATTCATAGACCAGACAACATTCCAGCAACAATAAATCTTCTAGAAGCAACATATCCAACAAAAGAAGAACCAATATGCACTTATGTACTTCAACTCATTGAATTAATAGGAAGAACTTCACCAATTTTCATATGTCATGATCTTCAAAGAAAGAAGAAATCAAATTCAAACACATCAATGGCAGAGAAGTTACTAGAATCATTTCGAAGTTTCGAAAGAGAGTTCCAAGATTGTTTAGTTGTCAGTGCATTCACAGCTATCTCGCCACCAGAAATGATGTACGACGATATATGTACACTAGCACTCGATAAACTTACATCACTTATTATTCTTCCTTTTCATCGACAATGGTTTTGTGATGGTAACTCGATCGAGCTAGAAGATGATTCATTAAGAGACGTAAACTACAGAGTTATGGAAAGAGCACCATGTGGGAAAGATGATAGAGAAGCACTTTTTTTCACAAAGAGAATGACTAAGAATCCACATGTGAAAGTTACCGTGGTTCGATTCTTGTCTTTCGATGATGTTGATGAAGATTCGAATGGAAATGGTTGGGAGGGTTTACTTGATAATGAACTATTGGATGAAATTAAGACAAAGAATAAAATTGGTAATGTTAGTGTTAAATATGTTGAGGAAATAGTGAAAGATGGACCAGAAACAGCATTGATTATAAGGTCTATGGTCACTAAATTTGATTTGATTGTTGTTGGGAGAAATGCTAGAGTTGATACTCCTCAAACTTCTGGATTGTTGCAATGGAGTGTGTATCCTGAACTTGGTGTTTTGGGAGATTTGTTGGTTTCTACTGATGCTGGTGGTAAAGCTTCTATTTTTGTTATACAACAACAAAGAACAATTATGGATGTTTAA 1893 0.3465 MSSKQNDTTTQFRTCIYLPPRVNSQNPWYETTVTRSFLGNSLTVLQMQMCLIFFGALFFKSIFCRFRIPRFTSMSIVGLIFATTFNKNWTGKMKMLFFFDSQENLGLISIFGFMLFLFYIGVKTDMSVVHKTRSGATKLGSIAIIAPYLCSMAVLNSYSSKYLQPEQVRILGSIIGFFCISSFPVIFSNLSDLKILNTELGRIGLSASLVSEVFNVFLASIITFSILHGERPTNGLVCVVAAALYIFMVIFIIRPAMFWIIKQTPEVIVVTKFVACMITSLCNGMPWNDVVCLSLIMSSKGIVEMAAFSLVRDFKKYAGYIKRNIIDLKSNSELRVLACIHRPDNIPATINLLEATYPTKEEPICTYVLQLIELIGRTSPIFICHDLQRKKKSNSNTSMAEKLLESFRSFEREFQDCLVVSAFTAISPPEMMYDDICTLALDKLTSLIILPFHRQWFCDGNSIELEDDSLRDVNYRVMERAPCGKDDREALFFTKRMTKNPHVKVTVVRFLSFDDVDEDSNGNGWEGLLDNELLDEIKTKNKIGNVSVKYVEEIVKDGPETALIIRSMVTKFDLIVVGRNARVDTPQTSGLLQWSVYPELGVLGDLLVSTDAGGKASIFVIQQQRTIMDV 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04022 630 PANTHER CATION/H + ANTIPORTER 269 312 - -
Trre10g04022 630 Gene3D - 44 267 IPR038770 -
Trre10g04022 630 Pfam Sodium/hydrogen exchanger family 50 262 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04022 Trre-Chr10 49461268 49464184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04022 270 628 Antiporter Super Family AT5G22900 36.866 2.51e-87 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g04022 K26731 - gmx:100785558 485.723