Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03987 ATGTCAAAGGGAGACAGTGTGACTGTTTTGGACTTTTGGGCTAGCCCTTTTTGTGCTAGAGTGAAGATTGCTTTGGAAGAGAAAAATGTGAACCATGTTGATAATGAAGAGGATATATTTGGAAGGAAAAGTGAGCTTCTTTTGAATTCAAATCCTATTCACCAAAAGGTGCCTGTGTTCTTGCACAATGACAAACCTGTCCTTGAATCTGCTATCATTGTTAACTATATTGATGAAGTGTGGCCTGAAAACTCATTGCTTCCATCTAATGCATATGATCGTGCACAAGCTAGATTTTGGGCTGATTTCATTGACAAAAAGGTATTTGACACTGGGAGGAGCATTTGGGCTAGCAATGGAGAAGAGAGAGAAGTAGGAACAAGGGACTTCATTGAAGTTTTAAAGCATCTAGAAGAAGCTCTTGGAGAGAAAGATTACTTTGGTGGTGATACCTTTGGCTATGTTGATATCATAGCCATTCCTCATTCTGCATGGTTTTTAGCATATGAGAAGCTTGGAGGTTTCAAAATTGAAGATCATTCCCCAAAAATATCTGCTTGGATTAAAAGGTCTTTGGAAAGAGAATCTGTGAAAAAGGTTCTTCCTGACCCCGAAAAGGTTTACCAATTTGTCCTTCATTTTAGGAAGATGTCAGGACTTGAATGA 666 0.3874 MSKGDSVTVLDFWASPFCARVKIALEEKNVNHVDNEEDIFGRKSELLLNSNPIHQKVPVFLHNDKPVLESAIIVNYIDEVWPENSLLPSNAYDRAQARFWADFIDKKVFDTGRSIWASNGEEREVGTRDFIEVLKHLEEALGEKDYFGGDTFGYVDIIAIPHSAWFLAYEKLGGFKIEDHSPKISAWIKRSLERESVKKVLPDPEKVYQFVLHFRKMSGLE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03987 221 CDD GST_N_Tau 7 81 - -
Trre10g03987 221 SFLD Main.3: Omega- and Tau-like 4 218 IPR045073 -
Trre10g03987 221 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Trre10g03987 221 Gene3D Glutaredoxin 1 89 - -
Trre10g03987 221 SFLD Glutathione Transferase (cytosolic) 4 218 IPR040079 -
Trre10g03987 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Trre10g03987 221 Pfam Glutathione S-transferase, N-terminal domain 6 79 IPR004045 -
Trre10g03987 221 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Trre10g03987 221 FunFam Tau class glutathione S-transferase 1 89 - -
Trre10g03987 221 Gene3D - 90 221 - -
Trre10g03987 221 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Trre10g03987 221 Pfam Glutathione S-transferase, C-terminal domain 129 190 - -
Trre10g03987 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 209 IPR045073 -
Trre10g03987 221 FunFam Glutathione S-transferase U20 90 221 - -
Trre10g03987 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 210 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03987 Trre-Chr10 49125920 49127363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03987 4 221 Glutathione S-transferase Gene Family AT1G17180 56.621 7.94e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03987 K00799 - gmx:100782914 397.897